RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 NEUROG3Q9Y4Z2 214 aa2.45□□□□□ -2.02
HERPUD1-211ENST00000566550 GPATCH8Q9UKJ3 1502 aaKnown RBP2.45□□□□□ -2.02
HERPUD1-211ENST00000566550 PALLDQ8WX93 1383 aa2.45□□□□□ -2.02
HERPUD1-211ENST00000566550 MLH3Q9UHC1 1453 aa2.45□□□□□ -2.02
HERPUD1-211ENST00000566550 ASTN1O14525 1302 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 SZT2Q5T011 3432 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 UGGT2Q9NYU1 1516 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 IGKV1-27A0A075B6S5 117 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 CENPVL3A0A0U1RRI6 287 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 A0A1B0GXF2 115 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 KPNA3O00505 521 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 PSPHP1O15172 72 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 NPIPB7O75200 414 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 PDCD6O75340 191 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 KCNK2O95069 426 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 MT-ND4P03905 459 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 HSPB1P04792 205 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 REG1AP05451 166 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 GABRA1P14867 456 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 CXCL3P19876 107 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 GABRR1P24046 479 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 PRSS3P35030 304 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 TGFBR2P37173 567 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 SULT1A1P50225 295 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 TAS2R43P59537 309 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 HERVK_113P61574 105 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 GRB2P62993 217 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 SLC35A2P78381 396 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 CASC10Q5T4H9 136 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 NXNL2Q5VZ03 156 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 OR10K2Q6IF99 312 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 TNFAIP8L2Q6P589 184 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 GSG1LQ6UXU4 331 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF497Q6ZNH5 498 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 NAA40Q86UY6 237 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 MDP1Q86V88 176 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 NIT1Q86X76 327 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 RIMKLAQ8IXN7 391 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 OR6V1Q8N148 313 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 TBC1D19Q8N5T2 526 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 POM121L12Q8N7R1 296 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 C20orf203Q8NBC4 194 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 OR1J4Q8NGS1 313 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 OR52P1PQ8NH57 321 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 OR10G6Q8NH81 332 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 MFSD8Q8NHS3 518 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 FAM172AQ8WUF8 416 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 TWIST2Q8WVJ9 160 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 SRSF12Q8WXF0 261 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 CCL17Q92583 94 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 ANKRD9Q96BM1 317 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 TM4SF18Q96CE8 201 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 IMP4Q96G21 291 aaKnown RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 TMEM101Q96IK0 257 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 DUX3Q96PT4 197 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 OR52B2Q96RD2 323 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 PLEKHF1Q96S99 279 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 VGLL1Q99990 258 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 NRIP2Q9BQI9 281 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 HDHD3Q9BSH5 251 aaPredicted RBP2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 C11orf49Q9H6J7 331 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 C8orf4Q9NR00 106 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 RBM12B-AS1Q9P1G2 102 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 VPS29Q9UBQ0 182 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 DKKL1Q9UK85 242 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 FBXO5Q9UKT4 447 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF337Q9Y3M9 751 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 INSIG2Q9Y5U4 225 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 ANKRD30AQ9BXX3 1397 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 FYCO1Q9BQS8 1478 aa2.44□□□□□ -2.02
HERPUD1-211ENST00000566550 DCCP43146 1447 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 ADGRL3Q9HAR2 1447 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 PTPN23Q9H3S7 1636 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 MYO5CQ9NQX4 1742 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CHD8Q9HCK8 2581 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 RAI1Q7Z5J4 1906 aaPredicted RBP2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 A0A087WWV3 80 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 IGHV3-74A0A0B4J1X5 117 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 LOC389332A0A1B0GUA5 103 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 SMIM9A6NGZ8 99 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CLDN24A6NM45 220 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 TRIM49D1C9J1S8 452 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 UPK2O00526 184 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 PI15O43692 258 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CD5LO43866 347 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CCDC22O60826 627 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CIAO1O76071 339 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 OR2A4O95047 310 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CD5P06127 495 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 MRPL3P09001 348 aaKnown RBP2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 ZDHHC11BP0C7U3 371 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 LINC00614P0C842 121 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 TDGF1P13385 188 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 FOLR2P14207 255 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 UCHL3P15374 230 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF17P17021 662 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CXCL2P19875 107 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 CFL1P23528 166 aaKnown RBP2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 HTR1EP28566 365 aa2.43□□□□□ -2.02
HERPUD1-211ENST00000566550 AGTR1P30556 359 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms