RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CDS2O95674 445 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 S100A8P05109 93 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 SRPXP78539 464 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 RHEBQ15382 184 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 OR8B8Q15620 311 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 TSC22D1Q15714 1073 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 LFNGQ8NES3 379 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 TMEM171Q8WVE6 324 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 TCEAL3Q969E4 200 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 PLEKHF2Q9H8W4 249 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 AHCTF1Q8WYP5 2266 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 COL6A3P12111 3177 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 DIDO1Q9BTC0 2240 aaKnown RBP12.25□□□□□ -0.45
CDH1-209ENST00000566510 RBFOX3A6NFN3 312 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 RPL36A-HNRNPH2H7BZ11 118 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 WRBO00258 174 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 HSPA12AO43301 675 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 DNPH1O43598 174 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 CLDN15P56746 228 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 WDR5BQ86VZ2 330 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 ZNF100Q8IYN0 542 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 TMEM252Q8N6L7 170 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 SPIN2AQ99865 258 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 SPIN2BQ9BPZ2 258 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 TUBA4BQ9H853 241 aa12.25□□□□□ -0.45
CDH1-209ENST00000566510 PATE3B3GLJ2 98 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 DYNLT3P51808 116 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 RUNX1Q01196 453 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 P4HA3Q7Z4N8 544 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 SELENOHQ8IZQ5 122 aaKnown RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 SLC25A31Q9H0C2 315 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 DOCK10Q96BY6 2186 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 IGKV1D-13A0A0B4J2D9 117 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 C5orf49A4QMS7 147 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 PROB1E7EW31 1015 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 MRPL33O75394 65 aaKnown RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 FABP1P07148 127 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 FBP1P09467 338 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 IGKV1-13P0DP09 117 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 EPHA1P21709 976 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 LILRB1Q8NHL6 650 aaPredicted RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 TAAR9Q96RI9 348 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 CCL28Q9NRJ3 127 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 NOSIPQ9Y314 301 aaKnown RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 LIPGQ9Y5X9 500 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 ZNF727A8MUV8 499 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 RPS10P46783 165 aaKnown RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 PRDX4Q13162 271 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 DAZAP2Q15038 168 aaPredicted RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 FAM185AQ8N0U4 392 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 CPNE4Q96A23 557 aaPredicted RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 CLDN23Q96B33 292 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 GLRX2Q9NS18 164 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 LYRM2Q9NU23 88 aaPredicted RBP12.24□□□□□ -0.45
CDH1-209ENST00000566510 PILRBQ9UKJ0 227 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 MMP24Q9Y5R2 645 aa12.24□□□□□ -0.45
CDH1-209ENST00000566510 H3BP45 60 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 CHST1O43916 411 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 HLA-HP01893 362 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 RND3P61587 244 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 ZNF154Q13106 437 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 IL22RA1Q8N6P7 574 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 TECTBQ96PL2 329 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 Q9N2K0 584 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 DEPPQ9NTK1 212 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 CRIM1Q9NZV1 1036 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 SLC22A20A6NK97 555 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 LINC00587B1AMM8 73 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 C3orf80F5H4A9 247 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 PITX3O75364 302 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 RPS23P62266 143 aaKnown RBP12.23□□□□□ -0.45
CDH1-209ENST00000566510 NCMAPQ5T1S8 102 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 RIPPLY2Q5TAB7 128 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 SLC25A24Q6NUK1 477 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
CDH1-209ENST00000566510 KDF1Q8NAX2 398 aaPredicted RBP12.23□□□□□ -0.45
CDH1-209ENST00000566510 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 C1QTNF5Q9BXJ0 243 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 METTL1Q9UBP6 276 aaKnown RBP12.23□□□□□ -0.45
CDH1-209ENST00000566510 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
CDH1-209ENST00000566510 ZNF732B4DXR9 585 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 H3BQ15 152 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 HS3ST1O14792 307 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 ATXN7O15265 892 aaPredicted RBP12.22□□□□□ -0.45
CDH1-209ENST00000566510 MMP7P09237 267 aaPredicted RBP12.22□□□□□ -0.45
CDH1-209ENST00000566510 TAGLN2P37802 199 aaKnown RBP12.22□□□□□ -0.45
CDH1-209ENST00000566510 ARF1P84077 181 aaKnown RBP12.22□□□□□ -0.45
CDH1-209ENST00000566510 Q0VFX4 171 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 AKR1C8PQ5T2L2 129 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 CMTM1Q8IZ96 169 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 PINLYPA6NC86 204 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 LRRC3CA6NJW4 275 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 TRAPPC2LH3BP13 241 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 TMEM50AO95807 157 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 UBE2KP61086 200 aa12.22□□□□□ -0.45
CDH1-209ENST00000566510 HERPUD1Q15011 391 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms