RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KIF2AO00139 706 aaPredicted RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 DCTN6O00399 190 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PLPP3O14495 311 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 CDC42EP2O14613 210 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 CHEK1O14757 476 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FFAR1O14842 300 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 AIM2O14862 343 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 POLR3GO15318 223 aaPredicted RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 BIRC5O15392 142 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PPIHO43447 177 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 EIF4E2O60573 245 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 TBX19O60806 448 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 SS18L1O75177 396 aaPredicted RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 MRPL33O75394 65 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 MFN2O95140 757 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 SNAPINO95295 136 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 BGLAPP02818 100 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 HLA-DPB1P04440 258 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 IL6P05231 212 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 CECR9P0C854 216 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PSKH1P11801 424 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ZNF35P13682 527 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ZNF43P17038 809 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 GPX2P18283 190 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PGCP20142 388 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 OMGP23515 440 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 LAP3P28838 519 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 GCKP35557 465 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 HPCAL1P37235 193 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 MPV17P39210 176 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 EIF1P41567 113 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 RPS27P42677 84 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 MAGEA8P43361 318 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 TMED10P49755 219 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 POLR2HP52434 150 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 ARFIP1P53367 373 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 SH3BGRP55822 239 aaPredicted RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 RAG2P55895 527 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 BIDP55957 195 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PRPS1P60891 318 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 DSTNP60981 165 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 GMFBP60983 142 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ERVK-25P63136 954 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 SLC35A1P78382 337 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 CCL8P80075 99 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 CDK6Q00534 326 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FMODQ06828 376 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PMS2P3Q13401 168 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 C1DQ13901 141 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 OR1Q1Q15612 314 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ZNF141Q15928 474 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 BCL2A1Q16548 175 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 SGCAQ16586 387 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ZNF674Q2M3X9 581 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 RSPO1Q2MKA7 263 aaPredicted RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 CEACAM16Q2WEN9 425 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 TMEM249Q2WGJ8 235 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FBXL19-AS1Q494R0 122 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 BEX5Q5H9J7 111 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 LY6G6FQ5SQ64 297 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FAM120AOSQ5T036 256 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 THEM4Q5T1C6 240 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ATAD3BQ5T9A4 648 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ANXA8L1Q5VT79 327 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 C1orf140Q5VVS0 124 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FBXW9Q5XUX1 488 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 AP1ARQ63HQ0 302 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 METAP1DQ6UB28 335 aaPredicted RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 CASP12Q6UXS9 341 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 LRRC74BQ6ZQY2 392 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 Q6ZT83 130 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FAM220AQ7Z4H9 259 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 CCDC91Q7Z6B0 441 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 BIVMQ86UB2 503 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 MDP1Q86V88 176 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 SNX32Q86XE0 403 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 STHQ8IWL8 128 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PDZD9Q8IXQ8 264 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PEX5LQ8IYB4 626 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 C20orf196Q8IYI0 205 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 LRRC34Q8IZ02 419 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 ZNF101Q8IZC7 436 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 HS3ST5Q8IZT8 346 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 OR5AS1Q8N127 324 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 BATF2Q8N1L9 274 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 MUC15Q8N387 334 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 FAM86B1Q8N7N1 296 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 DEFB108BQ8NET1 73 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 STEAP2Q8NFT2 490 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 OR9K2Q8NGE7 335 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 OR8J2Q8NGG1 315 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 OR51L1Q8NGJ5 315 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 OR6K3Q8NGY3 331 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 PSMA8Q8TAA3 256 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 C10orf105Q8TEF2 133 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 C10orf82Q8WW14 230 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 DYDC1Q8WWB3 177 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 GEMIN6Q8WXD5 167 aaKnown RBP0.85□□□□□ -2.27
SMG1-212ENST00000566328 CCL17Q92583 94 aa0.85□□□□□ -2.27
SMG1-212ENST00000566328 APH1AQ96BI3 265 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms