RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 C9orf62Q8N4C0 152 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 POC1AQ8NBT0 407 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 BHLHE23Q8NDY6 225 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 OR5M8Q8NGP6 311 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 S100PBPQ96BU1 408 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 ST6GALNAC5Q9BVH7 336 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 CXXC4Q9H2H0 198 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 FN3KRPQ9HA64 309 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 TMEM100Q9NV29 134 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 MGAT4AQ9UM21 535 aa14.24□□□□□ -0.13
RAB40C-210ENST00000566290 INTS1Q8N201 2190 aaKnown RBP14.23□□□□□ -0.13
RAB40C-210ENST00000566290 KIR2DS1A0A191URI9 304 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 C9orf170A2RU37 121 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 DBX1A6NMT0 343 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 CD8AP01732 235 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 IGHV3-13P01766 116 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 HLA-AP01891 365 aaKnown RBP14.23□□□□□ -0.13
RAB40C-210ENST00000566290 CTSDP07339 412 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-210ENST00000566290 CTXN2P0C2S0 81 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 IGFBP2P18065 325 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 BMP5P22003 454 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 DNASE1P24855 282 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 GCH1P30793 250 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 GLRXP35754 106 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 KIR2DS4P43632 304 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 ARPC4P59998 168 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 IFITM2Q01629 132 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF154Q13106 437 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 SNTB1Q13884 538 aaKnown RBP14.23□□□□□ -0.13
RAB40C-210ENST00000566290 KIR2DS1Q14954 304 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 OR8G1Q15617 311 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 SPATA46Q5T0L3 261 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF880Q6PDB4 577 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 MOB1BQ7L9L4 216 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 WDR86Q86TI4 376 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 OR2T35Q8NGX2 323 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 CAPSLQ8WWF8 208 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 PHB2Q99623 299 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 KCNJ16Q9NPI9 418 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 CA10Q9NS85 328 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 ABCA4P78363 2273 aa14.23□□□□□ -0.13
RAB40C-210ENST00000566290 IGLV3-9A0A075B6K5 115 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 HMSDA8MTL9 139 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 MCRIP1C9JLW8 97 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 CRYAAP02489 173 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 CFHR2P36980 270 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 MPV17P39210 176 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 CD200P41217 278 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 ERVS71-1P61550 626 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 PPP1R1AQ13522 171 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 LAMTOR1Q6IAA8 161 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 RGS7BPQ6MZT1 257 aaPredicted RBP14.22□□□□□ -0.13
RAB40C-210ENST00000566290 FIP1L1Q6UN15 594 aaKnown RBP14.22□□□□□ -0.13
RAB40C-210ENST00000566290 MEX3BQ6ZN04 569 aaKnown RBP14.22□□□□□ -0.13
RAB40C-210ENST00000566290 TMED4Q7Z7H5 227 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 ASCC1Q8N9N2 400 aaKnown RBP14.22□□□□□ -0.13
RAB40C-210ENST00000566290 SCCPDHQ8NBX0 429 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 OR52B4Q8NGK2 314 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 MARCH1Q8TCQ1 289 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 MDFIQ99750 246 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 C5orf66Q9H5L9 145 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF442Q9H7R0 627 aa14.22□□□□□ -0.13
RAB40C-210ENST00000566290 IGKV1D-8A0A087WSZ0 117 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 F5H5P2 479 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 MLNRO43193 412 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 CSN2P05814 226 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 OR5H8P0DN80 308 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 C4BPBP20851 252 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 CD34P28906 385 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 IL13RA1P78552 427 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 PAX5Q02548 391 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 C11orf88Q6PI97 169 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 FAM90A1Q86YD7 464 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 TGIF2LYQ8IUE0 185 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 NUP37Q8NFH4 326 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 OR10Z1Q8NGY1 313 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 TMEM230Q96A57 120 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 PIK3IP1Q96FE7 263 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 SPOCK3Q9BQ16 436 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 Q9N2K0 584 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 ZNF230Q9UIE0 474 aaPredicted RBP14.21□□□□□ -0.13
RAB40C-210ENST00000566290 JMJD1CQ15652 2540 aa14.21□□□□□ -0.13
RAB40C-210ENST00000566290 FAM221AA4D161 298 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 NPIPB11E5RHQ5 1161 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 F8VVB4 439 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 F8VWA3 439 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 SLC22A5O76082 557 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 SFT2D2O95562 160 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 RPS2P15880 293 aaKnown RBP14.2□□□□□ -0.14
RAB40C-210ENST00000566290 PRKACAP17612 351 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 LMO1P25800 156 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 CCKARP32238 428 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 GLP1RP43220 463 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 KCNJ3P48549 501 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 H2BFSP57053 126 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 FGL1Q08830 312 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 IKZF1Q13422 519 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 NDUFA5Q16718 116 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 LY6G6FQ5SQ64 297 aa14.2□□□□□ -0.14
RAB40C-210ENST00000566290 LIN54Q6MZP7 749 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms