RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 TENM1Q9UKZ4 2725 aa16.13■□□□□ 0.17
CMTM3-211ENST00000565922 IGHV2-26A0A0B4J1V2 119 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 A0A1W2PPK0 400 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 CLPSL1A2RUU4 121 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 MEGF11A6BM72 1044 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 FAM90A8PA6NJQ4 464 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 ZNF729A6NN14 1252 aaPredicted RBP16.12■□□□□ 0.17
CMTM3-211ENST00000565922 GTF2F2P13984 249 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 RBM11P57052 281 aaKnown RBP16.12■□□□□ 0.17
CMTM3-211ENST00000565922 PAX5Q02548 391 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 PIGYQ3MUY2 71 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 MINOS1Q5TGZ0 78 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 OLFML2AQ68BL7 652 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 LIAT1Q6ZQX7 453 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 RTN4RL2Q86UN3 420 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 ZNF565Q8N9K5 539 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 OR4D6Q8NGJ1 314 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 C17orf50Q8WW18 174 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 MRPS24Q96EL2 167 aaKnown RBP16.12■□□□□ 0.17
CMTM3-211ENST00000565922 COQ2Q96H96 371 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 DUSP21Q9H596 190 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 MINOS1-NBL1R4GNA1 71 aa16.12■□□□□ 0.17
CMTM3-211ENST00000565922 TRAV24A0A0B4J272 114 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 HSPB6O14558 160 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 OR7C1O76099 320 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-211ENST00000565922 MAS1P04201 325 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 RELBQ01201 579 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 SLC22A6Q4U2R8 563 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 AWAT2Q6E213 333 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 DTX3Q8N9I9 347 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 ZNF596Q8TC21 504 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 UFD1Q92890 307 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 AJUBAQ96IF1 538 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 OR5M11Q96RB7 305 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 NKX3-1Q99801 234 aaPredicted RBP16.11■□□□□ 0.17
CMTM3-211ENST00000565922 ABCB10Q9NRK6 738 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 RAB26Q9ULW5 256 aa16.11■□□□□ 0.17
CMTM3-211ENST00000565922 MRPS28Q9Y2Q9 187 aaKnown RBP16.11■□□□□ 0.17
CMTM3-211ENST00000565922 LSM2Q9Y333 95 aaKnown RBP16.11■□□□□ 0.17
CMTM3-211ENST00000565922 MAGEA13PA6NCF6 341 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 VGLL3A8MV65 326 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 ATP6V1G2O95670 118 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 CRHBPP24387 322 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 CDK2P24941 298 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 IRF3Q14653 427 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 ACSM3Q53FZ2 586 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 PRSS48Q7RTY5 328 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 LHFPL4Q7Z7J7 247 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 TAF15Q92804 592 aaKnown RBP eCLIP16.1■□□□□ 0.17
CMTM3-211ENST00000565922 MUL1Q969V5 352 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 CNBD2Q96M20 576 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 UQCC2Q9BRT2 126 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 CCDC90BQ9GZT6 254 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 SPACA1Q9HBV2 294 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 TCF7L1Q9HCS4 588 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 ING3Q9NXR8 418 aa16.1■□□□□ 0.17
CMTM3-211ENST00000565922 MEIKINA0A087WXM9 373 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 VHLP40337 213 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 GLP1RP43220 463 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 TRAM1Q15629 374 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 SSX2Q16385 188 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 RBM48Q5RL73 367 aaKnown RBP16.09■□□□□ 0.17
CMTM3-211ENST00000565922 PRAMEF5Q5TYX0 476 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 GLIPR1L1Q6UWM5 242 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 SUMF2Q8NBJ7 301 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 NDNFQ8TB73 568 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 PHYHIPQ92561 330 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 CREB3L1Q96BA8 519 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 TMED9Q9BVK6 235 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 DPCDQ9BVM2 203 aaPredicted RBP16.09■□□□□ 0.17
CMTM3-211ENST00000565922 PPIL3Q9H2H8 161 aaKnown RBP16.09■□□□□ 0.17
CMTM3-211ENST00000565922 ISYNA1Q9NPH2 558 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 GHRLQ9UBU3 117 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 KIF25Q9UIL4 384 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 PITPNC1Q9UKF7 332 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 RNF114Q9Y508 228 aa16.09■□□□□ 0.17
CMTM3-211ENST00000565922 KBTBD11-OT1A0A1B0GTJ5 212 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 H3BUI4 141 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 GEMIN2O14893 280 aaKnown RBP16.08■□□□□ 0.16
CMTM3-211ENST00000565922 PIN1P1O15428 100 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 TSPAN9O75954 239 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 PSMA1P25786 263 aaKnown RBP16.08■□□□□ 0.16
CMTM3-211ENST00000565922 HTR1DP28221 377 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 CD34P28906 385 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 ARHGDIBP52566 201 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 FAM189A2Q15884 450 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 UNQ9370/PRO34162Q6UXP9 181 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 Q6ZSV7 163 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 ABHD12Q8N2K0 398 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 LINC01006Q8NI28 216 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 WFDC12Q8WWY7 111 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 SGCDQ92629 289 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 C16orf95Q9H693 158 aa16.08■□□□□ 0.16
CMTM3-211ENST00000565922 MMP23AO75900 390 aa16.07■□□□□ 0.16
CMTM3-211ENST00000565922 HSMCR30P0CW71 290 aa16.07■□□□□ 0.16
CMTM3-211ENST00000565922 DYNLT3P51808 116 aa16.07■□□□□ 0.16
CMTM3-211ENST00000565922 MLLT11Q13015 90 aaPredicted RBP16.07■□□□□ 0.16
CMTM3-211ENST00000565922 RBM39Q14498 530 aaKnown RBP16.07■□□□□ 0.16
CMTM3-211ENST00000565922 LY6EQ16553 131 aa16.07■□□□□ 0.16
CMTM3-211ENST00000565922 ATAD3CQ5T2N8 411 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms