RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 BPIFB2Q8N4F0 458 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 FAM216BQ8N7L0 139 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 OR8B3Q8NGG8 313 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 ZFAND2BQ8WV99 257 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 NINJ1Q92982 152 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 PERPQ96FX8 193 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 OR8B2Q96RD0 313 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 CCL13Q99616 98 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 SDHCQ99643 169 aaPredicted RBP10.71□□□□□ -0.69
CLK3-214ENST00000564096 ZNF286AQ9HBT8 521 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 ZNF581Q9P0T4 197 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 KAAG1Q9UBP8 84 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 PCDHB10Q9UN67 800 aa10.71□□□□□ -0.69
CLK3-214ENST00000564096 RBMX2Q9Y388 322 aaKnown RBP10.71□□□□□ -0.69
CLK3-214ENST00000564096 ARFGEF3Q5TH69 2177 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 KIR2DS1A0A191URI9 304 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 TMEM82A0PJX8 343 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 MEIOCA2RUB1 952 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 MEIS3P1A6NDR6 274 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 CENPXA8MT69 81 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 K7N7A8 449 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 PSPNO60542 156 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 TK1P04183 234 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 AMY2BP19961 511 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 KIR2DS4P43632 304 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 TAS2R46P59540 309 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 EDDM3AQ14507 147 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 KIR2DS1Q14954 304 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 BAK1Q16611 211 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 KRBOX4Q5JUW0 171 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 C6orf183Q5T699 404 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 OLFML2AQ68BL7 652 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 SLC35E4Q6ICL7 350 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 TRAT1Q6PIZ9 186 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 BRICD5Q6PL45 260 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 C17orf107Q6ZR85 190 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 DNM1P46Q6ZS02 220 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 RTN4RL2Q86UN3 420 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 ZNF525Q8N782 197 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 SETD6Q8TBK2 473 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 FAM168AQ92567 244 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 DYRK2Q92630 601 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 COX4I2Q96KJ9 171 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 TMEM246Q9BRR3 403 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 TMEM165Q9HC07 324 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 RAB9BQ9NP90 201 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 SLC25A10Q9UBX3 287 aaPredicted RBP10.7□□□□□ -0.7
CLK3-214ENST00000564096 LPAR3Q9UBY5 353 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 MIOXQ9UGB7 285 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 CACNA1DQ01668 2161 aa10.7□□□□□ -0.7
CLK3-214ENST00000564096 NAV2Q8IVL1 2488 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 USP9YO00507 2555 aaPredicted RBP10.69□□□□□ -0.7
CLK3-214ENST00000564096 TRBV6-6A0A0A6YYG2 114 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 CEACAM18A8MTB9 384 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 ZNF736B4DX44 427 aaPredicted RBP10.69□□□□□ -0.7
CLK3-214ENST00000564096 SSX5O60225 188 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 NDUFS7O75251 213 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 NAPSAO96009 420 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 NDUFB7P17568 137 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 GIFP27352 417 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 P2RX3P56373 397 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 EDDM3BP56851 147 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 ARPC4P59998 168 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 SRSF7Q16629 238 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLK3-214ENST00000564096 RSBN1Q5VWQ0 802 aaPredicted RBP10.69□□□□□ -0.7
CLK3-214ENST00000564096 STEAP3Q658P3 488 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 ZNF497Q6ZNH5 498 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 HOGA1Q86XE5 327 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 LRRC75A-AS1Q8N1F1 130 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 ZNRF1Q8ND25 227 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 BEST4Q8NFU0 473 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 OR4S1Q8NGB4 309 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 MRPL30Q8TCC3 161 aaKnown RBP10.69□□□□□ -0.7
CLK3-214ENST00000564096 NRGNQ92686 78 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 C7orf50Q9BRJ6 194 aaKnown RBP10.69□□□□□ -0.7
CLK3-214ENST00000564096 LIME1Q9H400 295 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 KLK11Q9UBX7 282 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
CLK3-214ENST00000564096 TRAPPC2LQ9UL33 140 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 ANAPC10Q9UM13 185 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 MAB21L2Q9Y586 359 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 ICE1Q9Y2F5 2266 aa10.69□□□□□ -0.7
CLK3-214ENST00000564096 CHD3Q12873 2000 aaKnown RBP10.68□□□□□ -0.7
CLK3-214ENST00000564096 MEIKINA0A087WXM9 373 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 GPR37O15354 613 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 ORC5O43913 435 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 TFF1P04155 84 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 HEXAP06865 529 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 AKAIN1P0CW23 69 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 ERP29P30040 261 aaKnown RBP10.68□□□□□ -0.7
CLK3-214ENST00000564096 RBMXP38159 391 aaKnown RBP10.68□□□□□ -0.7
CLK3-214ENST00000564096 GLP1RP43220 463 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 NPY4RP50391 375 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 DYRK1AQ13627 763 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 MEF2DQ14814 521 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 DEFB113Q30KQ7 82 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 CHRFAM7AQ494W8 412 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 GAPTQ8N292 157 aa10.68□□□□□ -0.7
CLK3-214ENST00000564096 TMEM229BQ8NBD8 167 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms