RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SLC10A1Q14973 349 aa11.05□□□□□ -0.64
COMMD4-209ENST00000564068 M1APQ8TC57 530 aa11.05□□□□□ -0.64
COMMD4-209ENST00000564068 SOX7Q9BT81 388 aa11.05□□□□□ -0.64
COMMD4-209ENST00000564068 SLC7A10Q9NS82 523 aa11.05□□□□□ -0.64
COMMD4-209ENST00000564068 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
COMMD4-209ENST00000564068 GBF1Q92538 1859 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 B4DEV8 164 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ZNF32P17041 273 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 SUMO3P55854 103 aaPredicted RBP11.04□□□□□ -0.64
COMMD4-209ENST00000564068 KHDC3LQ587J8 217 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 TRIM61Q5EBN2 209 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 FFAR4Q5NUL3 377 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ABHD17BQ5VST6 288 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ATP5SQ99766 215 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 RAMP1O60894 148 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 FOLR3P41439 243 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 EDDM3BP56851 147 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 OR5I1Q13606 314 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 FDX2Q6P4F2 183 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 TMEM92Q6UXU6 159 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 VASH2Q86V25 355 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 MTCH1Q9NZJ7 389 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 NAT8Q9UHE5 227 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ZDHHC8Q9ULC8 765 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 C5orf52A6NGY3 159 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 CDS2O95674 445 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ISG15P05161 165 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 FZD5Q13467 585 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 SPINK9Q5DT21 86 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 NAT6Q93015 286 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ATG101Q9BSB4 218 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 ELOVL1Q9BW60 279 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 HIPK2Q9H2X6 1198 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 PCOLCE2Q9UKZ9 415 aa11.04□□□□□ -0.64
COMMD4-209ENST00000564068 TMEM14DPA8MWL7 114 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 CASP6P55212 293 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 TMEM164Q5U3C3 297 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 ETFRF1Q6IPR1 90 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 TAAR9Q96RI9 348 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 VAX2Q9UIW0 290 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 TRAV39A0A0B4J263 110 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 OR8U8P0C7N1 319 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 DTYMKP23919 212 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 CD27P26842 260 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 RALGAPA2Q2PPJ7 1873 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 PRAMEF5Q5TYX0 476 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 PRAMEF6Q5VXH4 476 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 DPPA3Q6W0C5 159 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 REC114Q7Z4M0 266 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 OR1K1Q8NGR3 316 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 NANOS1Q8WY41 292 aaKnown RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 CTDSP1Q9GZU7 261 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 Q9N2K0 584 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 MDC1Q14676 2089 aaKnown RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 ARHGEF17Q96PE2 2063 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 KIAA1324LA8MWY0 1029 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 AQP7O14520 342 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 SYNGR2O43760 224 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 APOA2P02652 100 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 RPS23P62266 143 aaKnown RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 ZNF468Q5VIY5 522 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 SPACA9Q96E40 222 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 LIN7CQ9NUP9 197 aaKnown RBP11.03□□□□□ -0.64
COMMD4-209ENST00000564068 STARD10Q9Y365 291 aa11.03□□□□□ -0.64
COMMD4-209ENST00000564068 ZNF646O15015 1829 aaPredicted RBP11.02□□□□□ -0.64
COMMD4-209ENST00000564068 CCL2P13500 99 aa11.02□□□□□ -0.64
COMMD4-209ENST00000564068 OR10G4Q8NGN3 311 aa11.02□□□□□ -0.64
COMMD4-209ENST00000564068 OR10G9Q8NGN4 311 aa11.02□□□□□ -0.64
COMMD4-209ENST00000564068 OR10G7Q8NGN6 311 aa11.02□□□□□ -0.64
COMMD4-209ENST00000564068 OR6X1Q8NH79 312 aa11.02□□□□□ -0.64
COMMD4-209ENST00000564068 BSCL2Q96G97 398 aaPredicted RBP11.02□□□□□ -0.64
COMMD4-209ENST00000564068 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.64
COMMD4-209ENST00000564068 GPR27Q9NS67 375 aa11.02□□□□□ -0.64
COMMD4-209ENST00000564068 K7EQS6 105 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 UBE2CO00762 179 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 ZNF17P17021 662 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 HOXA5P20719 270 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
COMMD4-209ENST00000564068 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
COMMD4-209ENST00000564068 TMEM50BP56557 158 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 TIPARPQ7Z3E1 657 aaKnown RBP11.02□□□□□ -0.65
COMMD4-209ENST00000564068 C1QL2Q7Z5L3 287 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 GCNT2Q8N0V5 402 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 CLDN23Q96B33 292 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 FOXB1Q99853 325 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 SMDT1Q9H4I9 107 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 CBLN4Q9NTU7 201 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 FAM206AQ9NX38 181 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 EPOPA6NHQ4 379 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 F8VVB4 439 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 F8VWA3 439 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 ZDHHC23Q8IYP9 409 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 PCGF1Q9BSM1 259 aa11.02□□□□□ -0.65
COMMD4-209ENST00000564068 AQP7P3A6NL99 342 aa11.01□□□□□ -0.65
COMMD4-209ENST00000564068 FCGR3AP08637 254 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms