RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 MAS1P04201 325 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 MYF6P23409 242 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 BDH1Q02338 343 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 SRSF4Q08170 494 aaKnown RBP24.89■■□□□ 1.58
CMTM4-204ENST00000563952 FAM189A2Q15884 450 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 LDLRAD2Q5SZI1 272 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 BAIAP2L2Q6UXY1 529 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 MALSU1Q96EH3 234 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 OR5M11Q96RB7 305 aa24.89■■□□□ 1.58
CMTM4-204ENST00000563952 RBM11P57052 281 aaKnown RBP24.88■■□□□ 1.57
CMTM4-204ENST00000563952 SLC22A6Q4U2R8 563 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 IZUMO2Q6UXV1 221 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 HEPN1Q6WQI6 88 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 MUL1Q969V5 352 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 ANKRD60Q9BZ19 345 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 ZNF581Q9P0T4 197 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 KIF25Q9UIL4 384 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 FOXJ3Q9UPW0 622 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 TPRKBQ9Y3C4 175 aa24.88■■□□□ 1.57
CMTM4-204ENST00000563952 FAM172BPA6NC97 362 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 PIN1P1O15428 100 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 MED22Q15528 200 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 OR52W1Q6IF63 320 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 OR4D6Q8NGJ1 314 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 NDNFQ8TB73 568 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 OR6C3Q9NZP0 311 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 HILPDAQ9Y5L2 63 aa24.87■■□□□ 1.57
CMTM4-204ENST00000563952 MEIKINA0A087WXM9 373 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 OR7C1O76099 320 aaPredicted RBP24.86■■□□□ 1.57
CMTM4-204ENST00000563952 MAPK3P27361 379 aaPredicted RBP24.86■■□□□ 1.57
CMTM4-204ENST00000563952 GDNFP39905 211 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 GLP1RP43220 463 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 RAB13P51153 203 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 SLC35A2P78381 396 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 SPHARQ15513 63 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 ABHD12Q8N2K0 398 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 SUMF2Q8NBJ7 301 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 PIFOQ8TCI5 191 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 THRSPQ92748 146 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 DPCDQ9BVM2 203 aaPredicted RBP24.86■■□□□ 1.57
CMTM4-204ENST00000563952 BARHL1Q9BZE3 327 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 PCDHB16Q9NRJ7 776 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 ABCB10Q9NRK6 738 aa24.86■■□□□ 1.57
CMTM4-204ENST00000563952 MRPS28Q9Y2Q9 187 aaKnown RBP24.86■■□□□ 1.57
CMTM4-204ENST00000563952 LSM2Q9Y333 95 aaKnown RBP24.86■■□□□ 1.57
CMTM4-204ENST00000563952 A0A1W2PP11 408 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 ZNF729A6NN14 1252 aaPredicted RBP24.85■■□□□ 1.57
CMTM4-204ENST00000563952 GEMIN2O14893 280 aaKnown RBP24.85■■□□□ 1.57
CMTM4-204ENST00000563952 ZNF780AO75290 641 aaPredicted RBP24.85■■□□□ 1.57
CMTM4-204ENST00000563952 INSL4Q14641 139 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 NHLRC3Q5JS37 347 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 MINOS1Q5TGZ0 78 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 PLPPR1Q8TBJ4 325 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 TMED9Q9BVK6 235 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 C16orf95Q9H693 158 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 MINOS1-NBL1R4GNA1 71 aa24.85■■□□□ 1.57
CMTM4-204ENST00000563952 VGLL3A8MV65 326 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 TSPAN9O75954 239 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 GTF2F2P13984 249 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 C17orf58Q2M2W7 97 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 SLC35E4Q6ICL7 350 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 BRICD5Q6PL45 260 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 GLIPR1L1Q6UWM5 242 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 OR13A1Q8NGR1 328 aa24.84■■□□□ 1.57
CMTM4-204ENST00000563952 HSPA13P48723 471 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 GPR176Q14439 515 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 IRF3Q14653 427 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 ACSM3Q53FZ2 586 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 ATAD3CQ5T2N8 411 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 RSBN1Q5VWQ0 802 aaPredicted RBP24.83■■□□□ 1.57
CMTM4-204ENST00000563952 AWAT2Q6E213 333 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 LINC00596Q86U02 117 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 RTN4RL2Q86UN3 420 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 ZNF565Q8N9K5 539 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 RAB18Q9NP72 206 aa24.83■■□□□ 1.57
CMTM4-204ENST00000563952 KBTBD11-OT1A0A1B0GTJ5 212 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 RGS10O43665 173 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 CHST1O43916 411 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 JUNBP17275 347 aaPredicted RBP24.82■■□□□ 1.56
CMTM4-204ENST00000563952 NFYBP25208 207 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 HTR1DP28221 377 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 KCNJ3P48549 501 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 PROK1P58294 105 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 LIAT1Q6ZQX7 453 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 MS4A15Q8N5U1 240 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 OR4P4Q8NGL7 312 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 CCDC90BQ9GZT6 254 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 DUSP21Q9H596 190 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 IFT22Q9H7X7 185 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 ZNF286AQ9HBT8 521 aa24.82■■□□□ 1.56
CMTM4-204ENST00000563952 KRTAP10-3P60369 221 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 MPV17LQ2QL34 196 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 FAM27D1Q5T7N8 215 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 CDH26Q8IXH8 852 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 NKAIN3Q8N8D7 197 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 OR4C13Q8NGP0 309 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 ZNF596Q8TC21 504 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 MRGPRDQ8TDS7 321 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 CNBD2Q96M20 576 aa24.81■■□□□ 1.56
CMTM4-204ENST00000563952 NCOR1P1Q9H4R4 102 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms