RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 NUBP2Q9Y5Y2 271 aa18.41■□□□□ 0.54
LINC01960-201ENST00000563759 TRAV6A0A075B6T7 132 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 IGKV1D-8A0A087WSZ0 117 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 RBMS2Q15434 407 aaKnown RBP18.4■□□□□ 0.54
LINC01960-201ENST00000563759 DTX2Q86UW9 622 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 PLPPR1Q8TBJ4 325 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 SLC6A7Q99884 636 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 SPOCK3Q9BQ16 436 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 RAB1BQ9H0U4 201 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 DCHS2Q6V1P9 2916 aa18.4■□□□□ 0.54
LINC01960-201ENST00000563759 OOEPA6NGQ2 149 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 CD8AP01732 235 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 Q6ZPA2 131 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 IDO2Q6ZQW0 420 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 PRRT1Q99946 306 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 GINS4Q9BRT9 223 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 C20orf85Q9H1P6 137 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 EHFQ9NZC4 300 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 METRNQ9UJH8 293 aa18.39■□□□□ 0.54
LINC01960-201ENST00000563759 H7C1Q1 480 aa18.39■□□□□ 0.53
LINC01960-201ENST00000563759 MUC1P15941 1255 aaPredicted RBP18.39■□□□□ 0.53
LINC01960-201ENST00000563759 HFEQ30201 348 aa18.39■□□□□ 0.53
LINC01960-201ENST00000563759 VAX1Q5SQQ9 334 aa18.39■□□□□ 0.53
LINC01960-201ENST00000563759 DEFB108BQ8NET1 73 aa18.39■□□□□ 0.53
LINC01960-201ENST00000563759 MRPL30Q8TCC3 161 aaKnown RBP18.39■□□□□ 0.53
LINC01960-201ENST00000563759 MARVELD1Q9BSK0 173 aa18.39■□□□□ 0.53
LINC01960-201ENST00000563759 TRAF4Q9BUZ4 470 aaPredicted RBP18.39■□□□□ 0.53
LINC01960-201ENST00000563759 UTP20O75691 2785 aaKnown RBP18.39■□□□□ 0.53
LINC01960-201ENST00000563759 TMEM178BH3BS89 294 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 ZNF735P0CB33 412 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 RAB25P57735 213 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 TSPAN5P62079 268 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 STUMQ69YW2 141 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 ZNF497Q6ZNH5 498 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 BTN2A1Q7KYR7 527 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 ANGPTL6Q8NI99 470 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 Q9N2K0 584 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 ZNF222Q9UK12 451 aa18.38■□□□□ 0.53
LINC01960-201ENST00000563759 TMEM82A0PJX8 343 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 INMT-MINDY4F8WBC2 141 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 NDUFB6O95139 128 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 OR3A1P47881 315 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 CDK10Q15131 360 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 ZMYND11Q15326 602 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 TEX36Q5VZQ5 186 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 C17orf107Q6ZR85 190 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 ARRDC1Q8N5I2 433 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 SLC2A8Q9NY64 477 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 AKAP6Q13023 2319 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 DSCAML1Q8TD84 2053 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 A1L4Q6 167 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 SDCBPO00560 298 aaPredicted RBP18.37■□□□□ 0.53
LINC01960-201ENST00000563759 KCNJ3P48549 501 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 GRK1Q15835 563 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 TMEM17Q86X19 198 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 PPP1R35Q8TAP8 253 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 SEBOXQ9HB31 216 aaPredicted RBP18.37■□□□□ 0.53
LINC01960-201ENST00000563759 NECAP2Q9NVZ3 263 aa18.37■□□□□ 0.53
LINC01960-201ENST00000563759 PPIAL4EA0A075B759 164 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 TRBV6-6A0A0A6YYG2 114 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 TRAV38-1A0A0B4J264 116 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 KIR2DS1A0A191URI9 304 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 TMEM30CPA0ZSE6 113 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 PPIAL4DF5H284 164 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 LGALS8O00214 317 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 ZNF737O75373 536 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 GYPAP02724 150 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 H2AFB2P0C5Z0 115 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 PPIAL4FP0DN26 164 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 KIR2DS4P43632 304 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 KIR2DS1Q14954 304 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 SRSF7Q16629 238 aaKnown RBP eCLIP18.36■□□□□ 0.53
LINC01960-201ENST00000563759 C20orf204Q6ZNR8 217 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 MOB1BQ7L9L4 216 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 TRAPPC2LQ9UL33 140 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 PPIAL4AQ9Y536 164 aa18.36■□□□□ 0.53
LINC01960-201ENST00000563759 ARPC1BO15143 372 aaKnown RBP18.35■□□□□ 0.53
LINC01960-201ENST00000563759 AESQ08117 197 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 Q6ZS49 121 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 OVCH2Q7RTZ1 564 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 ZNF561Q8N587 486 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 ZNRF1Q8ND25 227 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 CCDC107Q8WV48 283 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 NKX6-3A6NJ46 265 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 PLA2G2AP14555 144 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 TATDN3Q17R31 274 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 KRBOX4Q5JUW0 171 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 GAPTQ8N292 157 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 SNX22Q96L94 193 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 SLC25A21Q9BQT8 299 aaPredicted RBP18.35■□□□□ 0.53
LINC01960-201ENST00000563759 SHARPINQ9H0F6 387 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 CLEC4MQ9H2X3 399 aaPredicted RBP18.35■□□□□ 0.53
LINC01960-201ENST00000563759 FLVCR2Q9UPI3 526 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 USF3Q68DE3 2245 aa18.35■□□□□ 0.53
LINC01960-201ENST00000563759 CLDN1O95832 211 aa18.34■□□□□ 0.53
LINC01960-201ENST00000563759 GSTT2P0CG29 244 aa18.34■□□□□ 0.53
LINC01960-201ENST00000563759 RCC1P18754 421 aaPredicted RBP18.34■□□□□ 0.53
LINC01960-201ENST00000563759 EDDM3AQ14507 147 aa18.34■□□□□ 0.53
LINC01960-201ENST00000563759 SDSLQ96GA7 329 aa18.34■□□□□ 0.53
LINC01960-201ENST00000563759 ZNF665Q9H7R5 613 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms