RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CDH26Q8IXH8 852 aa16.69■□□□□ 0.26
TPM1-232ENST00000561425 GAL3ST2Q9H3Q3 398 aa16.69■□□□□ 0.26
TPM1-232ENST00000561425 LINC00574Q9H8X3 128 aa16.69■□□□□ 0.26
TPM1-232ENST00000561425 FOXJ3Q9UPW0 622 aa16.69■□□□□ 0.26
TPM1-232ENST00000561425 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
TPM1-232ENST00000561425 MAGEA13PA6NCF6 341 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 PIN1P1O15428 100 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 CDRT1O95170 752 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 KIR2DS4P43632 304 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 KCNJ3P48549 501 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 RSU1Q15404 277 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 OR52W1Q6IF63 320 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 OR4P4Q8NGL7 312 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 OR10K1Q8NGX5 313 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 DERL3Q96Q80 235 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 NR1H4Q96RI1 486 aaPredicted RBP16.68■□□□□ 0.26
TPM1-232ENST00000561425 NKX3-1Q99801 234 aaPredicted RBP16.68■□□□□ 0.26
TPM1-232ENST00000561425 CLEC7AQ9BXN2 247 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 METTL9Q9H1A3 318 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 PPIL3Q9H2H8 161 aaKnown RBP16.68■□□□□ 0.26
TPM1-232ENST00000561425 ERGIC3Q9Y282 383 aa16.68■□□□□ 0.26
TPM1-232ENST00000561425 ZNF729A6NN14 1252 aaPredicted RBP16.67■□□□□ 0.26
TPM1-232ENST00000561425 MYL12BO14950 172 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 HTR3BO95264 441 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 IGLV1-47P01700 117 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 CELP19835 753 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 CDK2P24941 298 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 GDNFP39905 211 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 IRF3Q14653 427 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 PIGYQ3MUY2 71 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 RSBN1Q5VWQ0 802 aaPredicted RBP16.67■□□□□ 0.26
TPM1-232ENST00000561425 CCBE1Q6UXH8 406 aaPredicted RBP16.67■□□□□ 0.26
TPM1-232ENST00000561425 UNQ9370/PRO34162Q6UXP9 181 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 BAIAP2L2Q6UXY1 529 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 TRAPPC6BQ86SZ2 158 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 OR14A2Q96R54 314 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 RANBP3Q9H6Z4 567 aaPredicted RBP16.67■□□□□ 0.26
TPM1-232ENST00000561425 RAB18Q9NP72 206 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 PAK1IP1Q9NWT1 392 aaPredicted RBP16.67■□□□□ 0.26
TPM1-232ENST00000561425 OR6C3Q9NZP0 311 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 ING4Q9UNL4 249 aa16.67■□□□□ 0.26
TPM1-232ENST00000561425 LSM2Q9Y333 95 aaKnown RBP16.67■□□□□ 0.26
TPM1-232ENST00000561425 TRRAPQ9Y4A5 3859 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 A6NDX4 124 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 FAM90A22PA8MWA6 464 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 ZNF780AO75290 641 aaPredicted RBP16.66■□□□□ 0.26
TPM1-232ENST00000561425 RBM11P57052 281 aaKnown RBP16.66■□□□□ 0.26
TPM1-232ENST00000561425 SLC35A2P78381 396 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 ATXN7L3Q14CW9 347 aaPredicted RBP16.66■□□□□ 0.26
TPM1-232ENST00000561425 SSX2Q16385 188 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 LY6EQ16553 131 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 PRAMEF5Q5TYX0 476 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 LINC00596Q86U02 117 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 ABHD12Q8N2K0 398 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 OSR2Q8N2R0 312 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 FAM192AQ9GZU8 254 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 DUSP21Q9H596 190 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 SCN3BQ9NY72 215 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 ZNF581Q9P0T4 197 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 CKLFQ9UBR5 152 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 TCF19Q9Y242 345 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 ST3GAL6Q9Y274 331 aa16.66■□□□□ 0.26
TPM1-232ENST00000561425 KBTBD11-OT1A0A1B0GTJ5 212 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 NPIPB11E5RHQ5 1161 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 CHST1O43916 411 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 RAB13P51153 203 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 DYNC1I2Q13409 638 aaKnown RBP16.65■□□□□ 0.26
TPM1-232ENST00000561425 PAN3Q58A45 887 aaKnown RBP16.65■□□□□ 0.26
TPM1-232ENST00000561425 ZNF565Q8N9K5 539 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 PLPPR1Q8TBJ4 325 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 MYDGFQ969H8 173 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 BARHL1Q9BZE3 327 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 PCDHB16Q9NRJ7 776 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 BLOC1S6Q9UL45 172 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 NBEAL1Q6ZS30 2694 aa16.65■□□□□ 0.26
TPM1-232ENST00000561425 A0A1W2PPK0 400 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 PTGES3LE9PB15 166 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 LY6LH3BQJ8 138 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 CD37P11049 281 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 HTR1DP28221 377 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 GP2P55259 537 aaKnown RBP16.64■□□□□ 0.25
TPM1-232ENST00000561425 FAM189A2Q15884 450 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 MPV17LQ2QL34 196 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 RBM48Q5RL73 367 aaKnown RBP16.64■□□□□ 0.25
TPM1-232ENST00000561425 Q8N2B8 174 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 MS4A15Q8N5U1 240 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 OR13A1Q8NGR1 328 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 SGCDQ92629 289 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 THRSPQ92748 146 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 OR5M11Q96RB7 305 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 MND1Q9BWT6 205 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 DPM3Q9P2X0 92 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 KIF25Q9UIL4 384 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 TPRKBQ9Y3C4 175 aa16.64■□□□□ 0.25
TPM1-232ENST00000561425 PNMA8CA0A1B0GUJ8 204 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 GEMIN2O14893 280 aaKnown RBP16.63■□□□□ 0.25
TPM1-232ENST00000561425 CSTBP04080 98 aaKnown RBP16.63■□□□□ 0.25
TPM1-232ENST00000561425 EFNB2P52799 333 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 GPR50Q13585 617 aa16.63■□□□□ 0.25
TPM1-232ENST00000561425 GPR176Q14439 515 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms