RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FAM221AA4D161 298 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 NKX6-3A6NJ46 265 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.64□□□□□ -1.03
USP3-219ENST00000561326 M0QYG6 137 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 MGST3O14880 152 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 DHFRP00374 187 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 PMP2P02689 132 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 HPXP02790 462 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 EGR1P18146 543 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 CD80P33681 288 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 KIR2DS4P43632 304 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
USP3-219ENST00000561326 KIR2DS1Q14954 304 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 CDK10Q15131 360 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 PLA1AQ53H76 456 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 VAX1Q5SQQ9 334 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 RSBN1Q5VWQ0 802 aaPredicted RBP8.64□□□□□ -1.03
USP3-219ENST00000561326 TEX36Q5VZQ5 186 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 C11orf71Q6IPW1 123 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 ZNF497Q6ZNH5 498 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 C20orf204Q6ZNR8 217 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 Q6ZS49 121 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 BTN2A1Q7KYR7 527 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 MOB1BQ7L9L4 216 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 ARRDC1Q8N5I2 433 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 OR51S1Q8NGJ8 323 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 OR56B4Q8NH76 319 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 ANGPTL6Q8NI99 470 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 SCGB3A2Q96PL1 93 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 SLC25A21Q9BQT8 299 aaPredicted RBP8.64□□□□□ -1.03
USP3-219ENST00000561326 HDHD3Q9BSH5 251 aaPredicted RBP8.64□□□□□ -1.03
USP3-219ENST00000561326 TINAGL1Q9GZM7 467 aaPredicted RBP8.64□□□□□ -1.03
USP3-219ENST00000561326 ZNF665Q9H7R5 613 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 Q9N2K0 584 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 NECAP2Q9NVZ3 263 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 KCNIP1Q9NZI2 227 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 ANXA10Q9UJ72 324 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 TRAPPC2LQ9UL33 140 aa8.64□□□□□ -1.03
USP3-219ENST00000561326 CLEC18AA5D8T8 446 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 TRDCB7Z8K6 153 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 K7N7A8 449 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 FSTL3O95633 263 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 CSN2P05814 226 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 SOD3P08294 240 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 H2AFB2P0C5Z0 115 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 RNF224P0DH78 156 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 PLA2G2AP14555 144 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 SPNP16150 400 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 CEBPDP49716 269 aaPredicted RBP8.63□□□□□ -1.03
USP3-219ENST00000561326 CCR6P51684 374 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 RAG2P55895 527 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 BTG1P62324 171 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 IL13RA1P78552 427 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 RBMS2Q15434 407 aaKnown RBP8.63□□□□□ -1.03
USP3-219ENST00000561326 SCGB2B2Q4G0G5 96 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 ATPAF1Q5TC12 328 aaPredicted RBP8.63□□□□□ -1.03
USP3-219ENST00000561326 STUMQ69YW2 141 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 CLEC18BQ6UXF7 455 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 SLC36A1Q7Z2H8 476 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 CD177Q8N6Q3 437 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 CLEC18CQ8NCF0 446 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 DEFB108BQ8NET1 73 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 OR6F1Q8NGZ6 308 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 TERB2Q8NHR7 220 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 DYRK2Q92630 601 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 SNAPC3Q92966 411 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 SDSLQ96GA7 329 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 TIMD4Q96H15 378 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 SLC6A7Q99884 636 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 MARVELD1Q9BSK0 173 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 FAM234AQ9H0X4 552 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
USP3-219ENST00000561326 SLC2A8Q9NY64 477 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 EHFQ9NZC4 300 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 USF3Q68DE3 2245 aa8.63□□□□□ -1.03
USP3-219ENST00000561326 LRRK2Q5S007 2527 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 AKAP6Q13023 2319 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 TRAV6A0A075B6T7 132 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 TMEM82A0PJX8 343 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 INMT-MINDY4F8WBC2 141 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 PSPNO60542 156 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 NDUFB6O95139 128 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 F12P00748 615 aaPredicted RBP8.62□□□□□ -1.03
USP3-219ENST00000561326 GYPAP02724 150 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 TK1P04183 234 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 OR5H8P0DN80 308 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 DAOP14920 347 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 GZMHP20718 246 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 COL8A2P25067 703 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 BTCP35070 178 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 ECI1P42126 302 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 GLP1RP43220 463 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 OR3A1P47881 315 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 SEC61A1P61619 476 aaKnown RBP8.62□□□□□ -1.03
USP3-219ENST00000561326 PAX5Q02548 391 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 AESQ08117 197 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 ATXN7L3Q14CW9 347 aaPredicted RBP8.62□□□□□ -1.03
USP3-219ENST00000561326 KRBOX4Q5JUW0 171 aa8.62□□□□□ -1.03
USP3-219ENST00000561326 FAM201AQ5SY85 155 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms