RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 KIF25Q9UIL4 384 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 PITPNC1Q9UKF7 332 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 ZNF281Q9Y2X9 895 aa13.83□□□□□ -0.2
CDC42BPB-208ENST00000561271 MAGEA13PA6NCF6 341 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 ZNF729A6NN14 1252 aaPredicted RBP13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 C17orf58Q2M2W7 97 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 TMEM95Q3KNT9 176 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR4D6Q8NGJ1 314 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR13A1Q8NGR1 328 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR52N1Q8NH53 320 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 PLPPR1Q8TBJ4 325 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 ZNF596Q8TC21 504 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 GGHQ92820 318 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 CDCA4Q9BXL8 241 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 TMEM138Q9NPI0 162 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 SERTAD4Q9NUC0 356 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 BABAM2Q9NXR7 383 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR6C3Q9NZP0 311 aa13.82□□□□□ -0.2
CDC42BPB-208ENST00000561271 MEIKINA0A087WXM9 373 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 TRBV5-5A0A0J9YX44 114 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 PNMA8CA0A1B0GUJ8 204 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 ANKRD65E5RJM6 399 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 XPNPEP2O43895 674 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 IGLV1-47P01700 117 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 CD24P25063 80 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 NFYBP25208 207 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 CD34P28906 385 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 BDKRB2P30411 391 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 ZNF93P35789 620 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 CAPGP40121 348 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 BDH1Q02338 343 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 ST3GAL4Q11206 333 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 FBLN7Q53RD9 439 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 OGFRL1Q5TC84 451 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 DMKNQ6E0U4 476 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 LAIR2Q6ISS4 152 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 Q6ZS46 218 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 RTN4RL2Q86UN3 420 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 C8orf59Q8N0T1 100 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 Q8N2B8 174 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 ZNF485Q8NCK3 441 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 CFHR4Q92496 578 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 GHSRQ92847 366 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 KIRREL1Q96J84 757 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 PGLYRP3Q96LB9 341 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR5M11Q96RB7 305 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 CHCHD3Q9NX63 227 aaKnown RBP13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 DPM3Q9P2X0 92 aa13.81□□□□□ -0.2
CDC42BPB-208ENST00000561271 PRKDCP78527 4128 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 ALDOBP05062 364 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 SERPINA2P20848 420 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 RBM11P57052 281 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 RPS11P62280 158 aaKnown RBP eCLIP13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 MED21Q13503 144 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 RIPK1Q13546 671 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 DOC2BQ14184 412 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 RBM39Q14498 530 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 HLA-DRB5Q30154 266 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 ARSJQ5FYB0 599 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 RSBN1Q5VWQ0 802 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 ASCL4Q6XD76 172 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 AHSA2Q719I0 299 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 Q8NFD4 153 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 OR14A2Q96R54 314 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 ZNF184Q99676 751 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 PRSS22Q9GZN4 317 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 CALYQ9NYX4 217 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 ING4Q9UNL4 249 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 HSPE1-MOB4S4R3N1 261 aa13.8□□□□□ -0.2
CDC42BPB-208ENST00000561271 TRAV8-7A0A075B6U6 113 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 A0A087X0M5 115 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 KBTBD11-OT1A0A1B0GTJ5 212 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 A0A1B0GX30 115 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 A0A1W2PP11 408 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 FAM90A22PA8MWA6 464 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 TOR1AO14656 332 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 CASQ2O14958 399 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 IGHV3-7P01780 117 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 IGFBP3P17936 291 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 BLCAPP62952 87 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 LTC4SQ16873 150 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 Q499Y3 187 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 YIF1BQ5BJH7 314 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 C1QL4Q86Z23 238 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 DTX3Q8N9I9 347 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 SUMF2Q8NBJ7 301 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 MRGPRDQ8TDS7 321 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 LEAP2Q969E1 77 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 DPCDQ9BVM2 203 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 METTL9Q9H1A3 318 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 IL36GQ9NZH8 169 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 ST3GAL6Q9Y274 331 aa13.79□□□□□ -0.2
CDC42BPB-208ENST00000561271 TRAV39A0A0B4J263 110 aa13.78□□□□□ -0.2
CDC42BPB-208ENST00000561271 A0A1W2PPK0 400 aa13.78□□□□□ -0.2
CDC42BPB-208ENST00000561271 EFCAB10A6NFE3 127 aa13.78□□□□□ -0.2
CDC42BPB-208ENST00000561271 LEUTXA8MZ59 168 aa13.78□□□□□ -0.2
CDC42BPB-208ENST00000561271 BUB1B-PAK6H3BSN5 160 aa13.78□□□□□ -0.2
CDC42BPB-208ENST00000561271 GEMIN2O14893 280 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-208ENST00000561271 MYL12BO14950 172 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms