RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PTX4Q96A99 478 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 FAM3DQ96BQ1 224 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 COQ2Q96H96 371 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 BARHL1Q9BZE3 327 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 CHST6Q9GZX3 395 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 PPA2Q9H2U2 334 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 BANF2Q9H503 90 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 TAS2R3Q9NYW6 316 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 NUP50Q9UKX7 468 aa7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 UBE2J1Q9Y385 318 aaPredicted RBP7.91□□□□□ -1.14
RABGGTA-221ENST00000561055 LOC100506127A0A0U1RQW1 187 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 CENPVL3A0A0U1RRI6 287 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 hCG_1809904A0A1W2PP81 198 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 A0A1W2PPE2 198 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 A0A1W2PQ09 198 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 A0A1W2PR64 198 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 A0A1W2PRV1 198 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 FOXI3A8MTJ6 420 aaPredicted RBP7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 CA11O75493 328 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 MPIG6BO95866 241 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 IL1AP01583 271 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 ZNF728P0DKX0 622 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 RAB6AP20340 208 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 FUT3P21217 361 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 EDDM3BP56851 147 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 SCAND1P57086 179 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 AESQ08117 197 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 SCGB2A2Q13296 93 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 BLMHQ13867 455 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 RBM39Q14498 530 aaKnown RBP7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 ZNF273Q14593 569 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 FAM189A2Q15884 450 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 RSBN1Q5VWQ0 802 aaPredicted RBP7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 SLC35E4Q6ICL7 350 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 OR10K2Q6IF99 312 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 IL17RELQ6ZVW7 336 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 OR4M1Q8NGD0 313 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 OR51D1Q8NGF3 324 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 URM1Q9BTM9 101 aaKnown RBP7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 DPCDQ9BVM2 203 aaPredicted RBP7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 TMEM59Q9BXS4 323 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 LPAR5Q9H1C0 372 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 RNF167Q9H6Y7 350 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 METTL8Q9H825 291 aaKnown RBP7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 LINC00574Q9H8X3 128 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 ZNF581Q9P0T4 197 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 RAB22AQ9UL26 194 aa7.9□□□□□ -1.14
RABGGTA-221ENST00000561055 ODAMA1E959 279 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 ZNF729A6NN14 1252 aaPredicted RBP7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 MCRIP1C9JLW8 97 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 PDCD6O75340 191 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 GABARAPO95166 117 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 CHATP28329 748 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 SRP14P37108 136 aaKnown RBP7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 RPL5P46777 297 aaKnown RBP7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 GLIPR1P48060 266 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 CLDN12P56749 244 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 EDDM3AQ14507 147 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 P2RY14Q15391 338 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 CTF1Q16619 201 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 HES5Q5TA89 166 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 GPR157Q5UAW9 335 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 NCR3LG1Q68D85 454 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 RAB12Q6IQ22 244 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 ZNF497Q6ZNH5 498 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 SLC16A12Q6ZSM3 486 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 VMO1Q7Z5L0 202 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 CROCCP3Q8IVE0 287 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 FAM185AQ8N0U4 392 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 ZNF565Q8N9K5 539 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 PLPPR1Q8TBJ4 325 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 ZNF714Q96N38 554 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 PCGF1Q9BSM1 259 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 PRDM13Q9H4Q3 707 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 LIN7BQ9HAP6 207 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 OR6C3Q9NZP0 311 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 ONECUT1Q9UBC0 465 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 HSF4Q9ULV5 492 aa7.89□□□□□ -1.15
RABGGTA-221ENST00000561055 TRGV10A0A0A0MS01 117 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 A0A0A6YYD4 124 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 IGHV1-69DA0A0B4J2H0 117 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 TMEM272A0A1B0GTI8 110 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 POM121CA8CG34 1229 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 NPIPB11E5RHQ5 1161 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 RNASEK-C17orf49H0YIS7 233 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 IGHV1-69P01742 117 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 MT-ND4P03905 459 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 IGHV1-8P0DP01 117 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 IGHV4-38-2P0DP08 117 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 SLC2A2P11168 524 aaPredicted RBP7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 CCL3L1P16619 93 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 GZMHP20718 246 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 EPHA1P21709 976 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 FPR2P25090 351 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 RPS19P39019 145 aaKnown RBP7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 UBE2E1P51965 193 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 TMEM50BP56557 158 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 ERVFRD-1P60508 538 aa7.88□□□□□ -1.15
RABGGTA-221ENST00000561055 GUCA2AQ02747 115 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms