RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 RPL36Q9Y3U8 105 aaKnown RBP12.94□□□□□ -0.34
SNX1-213ENST00000561026 TRAV24A0A0B4J272 114 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 LOC100130705A0A1B0GUX0 176 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 A0A1W2PRX2 142 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 OOSP1A8MZH6 123 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 HSPB6O14558 160 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 AMY1AP04745 511 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 AMY2AP04746 511 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 LPLP06858 475 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 RAB3AP20336 220 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 NFYBP25208 207 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 OR3A4PP47883 348 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 LPCAT4Q643R3 524 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 CCDC144NLQ6NUI1 221 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 WFDC9Q8NEX5 89 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 OR52I1Q8NGK6 324 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 HAVCR2Q8TDQ0 301 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 TSEN15Q8WW01 171 aaKnown RBP12.94□□□□□ -0.34
SNX1-213ENST00000561026 SGCDQ92629 289 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 KIRREL1Q96J84 757 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 NR1H4Q96RI1 486 aaPredicted RBP12.94□□□□□ -0.34
SNX1-213ENST00000561026 NCOR1P1Q9H4R4 102 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 NECAP2Q9NVZ3 263 aa12.94□□□□□ -0.34
SNX1-213ENST00000561026 MEIKINA0A087WXM9 373 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 MAGEB3O15480 346 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 MNDAP41218 407 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 GTF2A1P52655 376 aaPredicted RBP12.93□□□□□ -0.34
SNX1-213ENST00000561026 RBM39Q14498 530 aaKnown RBP12.93□□□□□ -0.34
SNX1-213ENST00000561026 PAN3Q58A45 887 aaKnown RBP12.93□□□□□ -0.34
SNX1-213ENST00000561026 Q8NFD4 153 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 OR51A2Q8NGJ7 313 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 OR9G1Q8NH87 305 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 CNIH3Q8TBE1 160 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 PHF21AQ96BD5 680 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 CPNE2Q96FN4 548 aaPredicted RBP12.93□□□□□ -0.34
SNX1-213ENST00000561026 BARHL1Q9BZE3 327 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 LINC00574Q9H8X3 128 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 FAM118AQ9NWS6 357 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 KIF25Q9UIL4 384 aa12.93□□□□□ -0.34
SNX1-213ENST00000561026 TCRBV4S1A1TA0A5B7 111 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 M0QZK8 103 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 GABRPO00591 440 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 PIN1P1O15428 100 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 LIMS3P0CW19 117 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 LIMS4P0CW20 117 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 C21orf33P30042 268 aaPredicted RBP12.92□□□□□ -0.34
SNX1-213ENST00000561026 GLP1RP43220 463 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 IL13RA2Q14627 380 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 ZSCAN26Q16670 478 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 KLHL22Q53GT1 634 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 ASCL4Q6XD76 172 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 OR13A1Q8NGR1 328 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 TNFAIP8L1Q8WVP5 186 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 APH1BQ8WW43 257 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 RGP1Q92546 391 aaPredicted RBP12.92□□□□□ -0.34
SNX1-213ENST00000561026 RPEQ96AT9 228 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 GPER1Q99527 375 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 JAM3Q9BX67 310 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 CALYQ9NYX4 217 aa12.92□□□□□ -0.34
SNX1-213ENST00000561026 TSSC4Q9Y5U2 329 aaPredicted RBP12.92□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A18PA6NE21 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A16PA6NEW6 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A20PA6NIJ5 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 SH2D7A6NKC9 451 aaPredicted RBP12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A9PA6NNJ1 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A12PA8MX19 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A5PA8MXJ8 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 J3QR06 171 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 CD33P20138 364 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 SOX2P48431 317 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 LOXL3P58215 753 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 PAX5Q02548 391 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 PIGYQ3MUY2 71 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 RSBN1Q5VWQ0 802 aaPredicted RBP12.91□□□□□ -0.34
SNX1-213ENST00000561026 CCDC121Q6ZUS5 278 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 THNSL2Q86YJ6 484 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 MRAPQ8TCY5 172 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 GPR148Q8TDV2 347 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 MYDGFQ969H8 173 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 PCDHB16Q9NRJ7 776 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 TAS2R4Q9NYW5 299 aa12.91□□□□□ -0.34
SNX1-213ENST00000561026 AMMECR1Q9Y4X0 333 aaPredicted RBP12.91□□□□□ -0.34
SNX1-213ENST00000561026 NPIPB11E5RHQ5 1161 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 IL1AP01583 271 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 IGHV3-7P01780 117 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 PF4V1P10720 104 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 IGLL1P15814 213 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 KCNJ3P48549 501 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 RSU1Q15404 277 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 CCDC58Q4VC31 144 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 FOXB2Q5VYV0 432 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 XAF1Q6GPH4 301 aa12.9□□□□□ -0.34
SNX1-213ENST00000561026 RPL22L1Q6P5R6 122 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms