RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PRRG3Q9BZD7 231 aa14.49□□□□□ -0.09
TPM1-226ENST00000560959 SLC33A1O00400 549 aaPredicted RBP14.48□□□□□ -0.09
TPM1-226ENST00000560959 RRP9O43818 475 aaKnown RBP14.48□□□□□ -0.09
TPM1-226ENST00000560959 PRKYO43930 277 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 SULT1C4O75897 302 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 LY86O95711 162 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 ZNF44P15621 663 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 ATF1P18846 271 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 C21orf33P30042 268 aaPredicted RBP14.48□□□□□ -0.09
TPM1-226ENST00000560959 EFNB1P98172 346 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 CFHR3Q02985 330 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 ZNF816Q0VGE8 651 aaPredicted RBP14.48□□□□□ -0.09
TPM1-226ENST00000560959 BNIP1Q12981 228 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 DIAPH2-AS1Q14236 149 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 AADACL4Q5VUY2 407 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 ZNF429Q86V71 674 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 SAXO1Q8IYX7 474 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 Q8N6K4 173 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 OR10A7Q8NGE5 316 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 CHCHD3Q9NX63 227 aaKnown RBP14.48□□□□□ -0.09
TPM1-226ENST00000560959 IDI2-AS1Q9NZ38 188 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 ZNF580Q9UK33 172 aa14.48□□□□□ -0.09
TPM1-226ENST00000560959 STARD9Q9P2P6 4700 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 IGKV1-12A0A0C4DH73 117 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 METTL15A6NJ78 407 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 NPIPB11E5RHQ5 1161 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 IGKV1D-12P01611 117 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 OR8U8P0C7N1 319 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 UBCP0CG48 685 aaKnown RBP14.47□□□□□ -0.09
TPM1-226ENST00000560959 PRKACGP22612 351 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 IZUMO1Q8IYV9 350 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 ADGRG5Q8IZF4 528 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 HS3ST5Q8IZT8 346 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 Q8N9W7 124 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 OR11H1Q8NG94 326 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 OR51T1Q8NGJ9 327 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 EAF1Q96JC9 268 aaPredicted RBP14.47□□□□□ -0.09
TPM1-226ENST00000560959 CHCHD6Q9BRQ6 235 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 OSBPL10Q9BXB5 764 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 CALYQ9NYX4 217 aa14.47□□□□□ -0.09
TPM1-226ENST00000560959 NCBP2LA6PVI3 153 aaKnown RBP14.46□□□□□ -0.09
TPM1-226ENST00000560959 H3BSH0 61 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 DEGS1O15121 323 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 IL1AP01583 271 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 GAPDHP04406 335 aaKnown RBP14.46□□□□□ -0.09
TPM1-226ENST00000560959 OR2T7P0C7T2 308 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 PSMB8P28062 276 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 SCN1BQ07699 218 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 PTGES3Q15185 160 aaKnown RBP14.46□□□□□ -0.09
TPM1-226ENST00000560959 HSP90B2PQ58FF3 399 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 SSX6Q7RTT6 188 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 OR2T10Q8NGZ9 312 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 MYOZ3Q8TDC0 251 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 ASB9Q96DX5 294 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 ADAT3Q96EY9 351 aaPredicted RBP14.46□□□□□ -0.09
TPM1-226ENST00000560959 LRGUKQ96M69 825 aa14.46□□□□□ -0.09
TPM1-226ENST00000560959 PPIL3Q9H2H8 161 aaKnown RBP14.46□□□□□ -0.09
TPM1-226ENST00000560959 SORL1Q92673 2214 aa14.46□□□□□ -0.1
TPM1-226ENST00000560959 MT-ND2P03891 347 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 FRMD6-AS1P0C7T7 363 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 RUNX1Q01196 453 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 PAX5Q02548 391 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 ATXN7L3Q14CW9 347 aaPredicted RBP14.45□□□□□ -0.1
TPM1-226ENST00000560959 TMEM244Q5VVB8 128 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 BCDIN3DQ7Z5W3 292 aaKnown RBP14.45□□□□□ -0.1
TPM1-226ENST00000560959 PRSS35Q8N3Z0 413 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 OR8H1Q8NGG4 311 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 OR10X1Q8NGY0 326 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 UBE2E2Q96LR5 201 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 OPALINQ96PE5 141 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 BARHL1Q9BZE3 327 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 PLSCR3Q9NRY6 295 aa14.45□□□□□ -0.1
TPM1-226ENST00000560959 IGHV1-3A0A0C4DH29 117 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 LOC107986453A0A1B0GWG9 222 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 A0A1W2PQL4 384 aaPredicted RBP14.44□□□□□ -0.1
TPM1-226ENST00000560959 B2RBV5 119 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 HSD17B6O14756 317 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 IGF1P05019 195 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 OR5H8P0DN80 308 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 VDAC1P21796 283 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 CDK5R1Q15078 307 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 OVCH2Q7RTZ1 564 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 MOB3BQ86TA1 216 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 GID4Q8IVV7 300 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 FAM71E2Q8N5Q1 922 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 OR13A1Q8NGR1 328 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 TMEM163Q8TC26 289 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 CANT1Q8WVQ1 401 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 LEAP2Q969E1 77 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 RNFT2Q96EX2 444 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 NRBF2Q96F24 287 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 ING3Q9NXR8 418 aa14.44□□□□□ -0.1
TPM1-226ENST00000560959 MEIKINA0A087WXM9 373 aa14.43□□□□□ -0.1
TPM1-226ENST00000560959 AQP12BA6NM10 295 aa14.43□□□□□ -0.1
TPM1-226ENST00000560959 I3L521 148 aa14.43□□□□□ -0.1
TPM1-226ENST00000560959 DCTN3O75935 186 aa14.43□□□□□ -0.1
TPM1-226ENST00000560959 IGHV3-7P01780 117 aa14.43□□□□□ -0.1
TPM1-226ENST00000560959 ISG15P05161 165 aa14.43□□□□□ -0.1
TPM1-226ENST00000560959 HCKP08631 526 aa14.43□□□□□ -0.1
TPM1-226ENST00000560959 CD1BP29016 333 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms