RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 OR6K6Q8NGW6 343 aa7.33□□□□□ -1.24
HERC1-210ENST00000560897 MYOZ3Q8TDC0 251 aa7.33□□□□□ -1.24
HERC1-210ENST00000560897 NABP2Q9BQ15 211 aa7.33□□□□□ -1.24
HERC1-210ENST00000560897 CHST6Q9GZX3 395 aa7.33□□□□□ -1.24
HERC1-210ENST00000560897 HES4Q9HCC6 221 aa7.33□□□□□ -1.24
HERC1-210ENST00000560897 SIGLEC8Q9NYZ4 499 aa7.33□□□□□ -1.24
HERC1-210ENST00000560897 CDH10Q9Y6N8 788 aa7.33□□□□□ -1.24
HERC1-210ENST00000560897 A0A1W2PPI3 338 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 TMEM82A0PJX8 343 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 SNTNA6NMZ2 147 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 EI24O14681 340 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 MGST3O14880 152 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 SOX14O95416 240 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 NRASP01111 189 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 IGLV1-51P01701 117 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 NFYBP25208 207 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 SOX6P35712 828 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 PTGFRP43088 359 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 GSSP48637 474 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 BLVRAP53004 296 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 CRISP1P54107 249 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 P2RX3P56373 397 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 CDC42P60953 191 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 PRR20EP86478 221 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 PRR20CP86479 221 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 PRR20DP86480 221 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 PRR20BP86481 221 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 PRR20AP86496 221 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 MFGE8Q08431 387 aaPredicted RBP7.32□□□□□ -1.24
HERC1-210ENST00000560897 MADCAM1Q13477 382 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 RIPK1Q13546 671 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 TEX30Q5JUR7 227 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 FAM53AQ6NSI3 398 aaPredicted RBP7.32□□□□□ -1.24
HERC1-210ENST00000560897 CD300LDQ6UXZ3 194 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 TMEM179BQ7Z7N9 219 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 HS3ST5Q8IZT8 346 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 ZNF511Q8NB15 262 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 OR6N2Q8NGY6 317 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 OR9G1Q8NH87 305 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 RNF133Q8WVZ7 376 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 ITFG2Q969R8 447 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 FLYWCH2Q96CP2 140 aaKnown RBP7.32□□□□□ -1.24
HERC1-210ENST00000560897 NIPSNAP1Q9BPW8 284 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 ALX4Q9H161 411 aaPredicted RBP7.32□□□□□ -1.24
HERC1-210ENST00000560897 EGLN3Q9H6Z9 239 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 PLEKHA1Q9HB21 404 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 IMPAD1Q9NX62 359 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 TAS2R3Q9NYW6 316 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 ENPP5Q9UJA9 477 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 SLC7A11Q9UPY5 501 aa7.32□□□□□ -1.24
HERC1-210ENST00000560897 ATP6V1G2O95670 118 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 HAND1O96004 215 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 ZNF3P17036 446 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 ERP29P30040 261 aaKnown RBP7.31□□□□□ -1.24
HERC1-210ENST00000560897 GSTT1P30711 240 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 OPRL1P41146 370 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 DAPP51397 102 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 GINS1Q14691 196 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 ZIK1Q3SY52 487 aaPredicted RBP7.31□□□□□ -1.24
HERC1-210ENST00000560897 LINC01559Q495D7 138 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 LPCAT4Q643R3 524 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 MOB3BQ86TA1 216 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 PACRGLQ8N7B6 248 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 OR8B12Q8NGG6 310 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 OR2T10Q8NGZ9 312 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 CHAC2Q8WUX2 184 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 CYGBQ8WWM9 190 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 RGP1Q92546 391 aaPredicted RBP7.31□□□□□ -1.24
HERC1-210ENST00000560897 EAF1Q96JC9 268 aaPredicted RBP7.31□□□□□ -1.24
HERC1-210ENST00000560897 FUZQ9BT04 418 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 ABHD6Q9BV23 337 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 KLK15Q9H2R5 256 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 PLEKHA3Q9HB20 300 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 ING3Q9NXR8 418 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 SMPD3Q9NY59 655 aaPredicted RBP7.31□□□□□ -1.24
HERC1-210ENST00000560897 IL20Q9NYY1 176 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 TVP23BQ9NYZ1 205 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 ZNF580Q9UK33 172 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 COPS3Q9UNS2 423 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 PIGLQ9Y2B2 252 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 VPS13DQ5THJ4 4388 aa7.31□□□□□ -1.24
HERC1-210ENST00000560897 DNAH11Q96DT5 4516 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 IGHV4OR15-8A0A075B7B6 117 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 A0A087WW49 117 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 A0A087X0M5 115 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 A0A1B0GX30 115 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 ARPC1BO15143 372 aaKnown RBP7.3□□□□□ -1.24
HERC1-210ENST00000560897 ST8SIA5O15466 376 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 TPPPO94811 219 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 IGHA1P01876 353 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 IGF1P05019 195 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 GYPBP06028 91 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 LGALS1P09382 135 aaKnown RBP7.3□□□□□ -1.24
HERC1-210ENST00000560897 ATP6V1B1P15313 513 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 ATP6V1E1P36543 226 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 RAB9AP51151 201 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 RPS7P62081 194 aaKnown RBP7.3□□□□□ -1.24
HERC1-210ENST00000560897 PTGES3Q15185 160 aaKnown RBP7.3□□□□□ -1.24
HERC1-210ENST00000560897 TTC23Q5W5X9 447 aa7.3□□□□□ -1.24
HERC1-210ENST00000560897 KDM4DQ6B0I6 523 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms