RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 MPC1Q9Y5U8 109 aa11.17□□□□□ -0.62
SMAD3-214ENST00000560402 VWFP04275 2813 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 IGHV3OR15-7A0A075B7D8 119 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 A0A0B4J203 849 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 A0A0U1RQK1 487 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 METTL21EPA6NDL7 271 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 NKX6-3A6NJ46 265 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 DHRS7CA6NNS2 312 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 GABARAPH6UMI1 98 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 NDUFB3O43676 98 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 FCN3O75636 299 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 ARSBP15848 533 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 IER3P46695 156 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 POU3F4P49335 361 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 CLDN12P56749 244 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 MADCAM1Q13477 382 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 GFOD2Q3B7J2 385 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 MIDNQ504T8 468 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 STUMQ69YW2 141 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 RAB12Q6IQ22 244 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 KRT74Q7RTS7 529 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 PRSS45Q7RTY3 260 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 NRARPQ7Z6K4 114 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 C11orf53Q8IXP5 236 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 LY6G5BQ8NDX9 201 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 C8orf46Q8TAG6 207 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 SMIM4Q8WVI0 70 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 DEDD2Q8WXF8 326 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 PPP1R14AQ96A00 147 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 MICU1Q9BPX6 476 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 COPZ2Q9P299 210 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 ONECUT1Q9UBC0 465 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 FAM96BQ9Y3D0 163 aa11.16□□□□□ -0.62
SMAD3-214ENST00000560402 NAP1L6A6NFF2 107 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-214ENST00000560402 XRCC3O43542 346 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 ORC5O43913 435 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 DHRS3O75911 302 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 BPNT1O95861 308 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 IGHV4-59P01825 116 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 HCKP08631 526 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 UBBP0CG47 229 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 RAB6AP20340 208 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.62
SMAD3-214ENST00000560402 GSK3AP49840 483 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 LRRC10Q5BKY1 277 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 C1orf100Q5SVJ3 147 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 ATPAF1Q5TC12 328 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-214ENST00000560402 RSBN1Q5VWQ0 802 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-214ENST00000560402 LINC01006Q8NI28 216 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 SGK3Q96BR1 496 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 ITPKCQ96DU7 683 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 SLC25A38Q96DW6 304 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 CCL13Q99616 98 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 DCTN5Q9BTE1 182 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 C11orf54Q9H0W9 315 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-214ENST00000560402 TAS2R8Q9NYW2 309 aa11.15□□□□□ -0.62
SMAD3-214ENST00000560402 A0A1B0GTI1 187 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 ALDOBP05062 364 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 CD37P11049 281 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 PROK1P58294 105 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 TAS2R20P59543 309 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 DYRK1AQ13627 763 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 DHRS7BQ6IAN0 325 aaPredicted RBP11.14□□□□□ -0.63
SMAD3-214ENST00000560402 FAM216BQ8N7L0 139 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 OR51D1Q8NGF3 324 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 OR13C9Q8NGT0 318 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 ABHD1Q96SE0 405 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 GPER1Q99527 375 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 ATG5Q9H1Y0 275 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 DNAJB11Q9UBS4 358 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 VPREB3Q9UKI3 123 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 RAB22AQ9UL26 194 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 RHBDD3Q9Y3P4 386 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 TGP01266 2768 aa11.14□□□□□ -0.63
SMAD3-214ENST00000560402 NOTCH1P46531 2555 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 A0A1B0GW55 424 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 CDIPTO14735 213 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 ALX3O95076 343 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 CST4P01036 141 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4L2P0CJ85 424 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4L3P0CJ86 424 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4L4P0CJ87 422 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4L5P0CJ88 424 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4L6P0CJ89 424 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4L7P0CJ90 424 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 CDK2P24941 298 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 ZNF93P35789 620 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-214ENST00000560402 SSBP1Q04837 148 aaKnown RBP11.13□□□□□ -0.63
SMAD3-214ENST00000560402 SRSF4Q08170 494 aaKnown RBP11.13□□□□□ -0.63
SMAD3-214ENST00000560402 CNN3Q15417 329 aaKnown RBP11.13□□□□□ -0.63
SMAD3-214ENST00000560402 TAF9Q16594 264 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 C2orf76Q3KRA6 126 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 NCR3LG1Q68D85 454 aa11.13□□□□□ -0.63
SMAD3-214ENST00000560402 DUX4L9Q6RFH8 374 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-214ENST00000560402 UTS2BQ765I0 119 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms