RNA–Protein interactions for RNA: ENST00000560339.1

AC066612.1-201, humanhuman

TSL 3

Gene AC066612.1, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC066612.1-201ENST00000560339 ABCA4P78363 2273 aa-0.14□□□□□ -2.43
AC066612.1-201ENST00000560339 SYNE1Q8NF91 8797 aaKnown RBP-0.14□□□□□ -2.43
AC066612.1-201ENST00000560339 ZFYVE26Q68DK2 2539 aa-0.14□□□□□ -2.43
AC066612.1-201ENST00000560339 CREBBPQ92793 2442 aa-0.14□□□□□ -2.43
AC066612.1-201ENST00000560339 NIPBLQ6KC79 2804 aaeCLIP-0.14□□□□□ -2.43
AC066612.1-201ENST00000560339 POLEQ07864 2286 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 TENM2Q9NT68 2774 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 FAM208BQ5VWN6 2430 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 NINLQ9Y2I6 1382 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 MAP1AP78559 2803 aaPredicted RBP-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 IGHV2OR16-5A0A0B4J2B6 119 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 RFPL4AA6NLU0 287 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 RFPL4AL1F8VTS6 287 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 DFFAO00273 331 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 SPOPO43791 374 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 WBP4O75554 376 aaKnown RBP-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 OR2F2O95006 317 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 CRPP02741 224 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 PRTN3P24158 256 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 GPR1P46091 355 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 RAB25P57735 213 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 RGS8P57771 180 aaPredicted RBP-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 RELAQ04206 551 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 BNIP2Q12982 314 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 IDI1Q13907 227 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 ACTBL2Q562R1 376 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 SDIM1Q6ZPB5 146 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 CENPQQ7L2Z9 268 aaPredicted RBP-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 GLT6D1Q7Z4J2 308 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 PPP1R42Q7Z4L9 355 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 FAM19A2Q8N3H0 131 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 KRTCAP2Q8N6L1 136 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 C15orf53Q8NAA6 179 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 OR52K1Q8NGK4 314 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 LHFPL5Q8TAF8 219 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 NT5CQ8TCD5 201 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 KCTD4Q8WVF5 259 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 LINC01587Q99440 93 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 C20orf144Q9BQM9 153 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 NAA50Q9GZZ1 169 aaKnown RBP-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 C6orf50Q9HD87 102 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 SLC22A14Q9Y267 594 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 AP3M1Q9Y2T2 418 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 WASHC3Q9Y3C0 194 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 TRPM6Q9BX84 2022 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 PDZD2O15018 2839 aa-0.15□□□□□ -2.43
AC066612.1-201ENST00000560339 KMT2CQ8NEZ4 4911 aaKnown RBP-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 HECTD1Q9ULT8 2610 aa-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 POLR3AO14802 1390 aaPredicted RBP-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 ACANP16112 2415 aa-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 APCP25054 2843 aa-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 LAMB4A4D0S4 1761 aa-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 COL18A1P39060 1754 aa-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 USP9YO00507 2555 aaPredicted RBP-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 PTPRZ1P23471 2315 aaPredicted RBP-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 IGF2RP11717 2491 aa-0.16□□□□□ -2.43
AC066612.1-201ENST00000560339 TMSB15BA0A087X1C1 80 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 FAM240AA0A1B0GVK7 77 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 C11orf86A6NJI1 115 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 OR2AT4A6NND4 320 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 ZNF705FA8MVS1 300 aaPredicted RBP-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 H3BP45 60 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 UPK2O00526 184 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 PRMT5O14744 637 aaPredicted RBP-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 TCAPO15273 167 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 MRPS14O60783 128 aaKnown RBP-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 ZNF737O75373 536 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 NPPAP01160 153 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 PRKACAP17612 351 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 GPX2P18283 190 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 PLTPP55058 493 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 ATP5IP56385 69 aaPredicted RBP-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 C21orf59P57076 290 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 ATP6V0D1P61421 351 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 ZNF90Q03938 601 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 C2orf80Q0P641 193 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 C5orf64Q2M2E5 130 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 Q499Y3 187 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 TMEM155Q4W5P6 130 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 IDNKQ5T6J7 187 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 GLYATQ6IB77 296 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 UGT2A3Q6UWM9 527 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 SBSPONQ8IVN8 264 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 GABRG1Q8N1C3 465 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 TRAM1L1Q8N609 369 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 LFNGQ8NES3 379 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 ZFAND1Q8TCF1 268 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 SPPL2BQ8TCT7 592 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 CD200R1Q8TD46 325 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 FAM131CQ96AQ9 280 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 FMC1Q96HJ9 113 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 SLC35G5Q96KT7 338 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 OLFM3Q96PB7 478 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 TSGA13Q96PP4 275 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 PANX1Q96RD7 426 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 TGS1Q96RS0 853 aaKnown RBP-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 SHCBP1LQ9BZQ2 653 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 TM6SF2Q9BZW4 377 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 C8orf4Q9NR00 106 aa-0.16□□□□□ -2.44
AC066612.1-201ENST00000560339 MED9Q9NWA0 146 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms