RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MMP27Q9H306 513 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 MS4A5Q9H3V2 200 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 AKIP1Q9NQ31 210 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 AK3Q9UIJ7 227 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ZNF222Q9UK12 451 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 RAB22AQ9UL26 194 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 MRPS7Q9Y2R9 242 aaKnown RBP4.34□□□□□ -1.71
SPG11-220ENST00000559933 ETV7Q9Y603 341 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 AKAP9Q99996 3911 aa4.34□□□□□ -1.71
SPG11-220ENST00000559933 ABCA2Q9BZC7 2435 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 C2CD3Q4AC94 2353 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 PPIAL4EA0A075B759 164 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 LINC00854A0A1B0GVQ3 168 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 LRRC30A6NM36 301 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CEACAM18A8MTB9 384 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CLDN25C9JDP6 229 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 PPIAL4DF5H284 164 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 LGALS8O00214 317 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 MFNGO00587 321 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 DEGS1O15121 323 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 NOS1APO75052 506 aaPredicted RBP4.33□□□□□ -1.72
SPG11-220ENST00000559933 PDCD6O75340 191 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 KNG1P01042 644 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 HLA-DQB1P01920 261 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CD3GP09693 182 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 UBBP0CG47 229 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 PPIAL4FP0DN26 164 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 IRF2P14316 349 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 HIST1H1DP16402 221 aaKnown RBP4.33□□□□□ -1.72
SPG11-220ENST00000559933 NAT1P18440 290 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 TNFRSF1AP19438 455 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CPT2P23786 658 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CHATP28329 748 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CD40LGP29965 261 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 PRDX2P32119 198 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 OR3A1P47881 315 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 PSMD7P51665 324 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CAPZA1P52907 286 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ATP5J2P56134 94 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 DLX1P56177 255 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 KRTAP10-2P60368 255 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 BTG1P62324 171 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 IFITM3Q01628 133 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 MZT1Q08AG7 82 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 EDDM3AQ14507 147 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ZNF146Q15072 292 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 SMIM21Q3B7S5 101 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ZNF260Q3ZCT1 412 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CDNFQ49AH0 187 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 PYDC2Q56P42 97 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 UTF1Q5T230 341 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 TEX36Q5VZQ5 186 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ELP2Q6IA86 826 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 RAB12Q6IQ22 244 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 C17orf107Q6ZR85 190 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 Q6ZTK2 550 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 LRRC28Q86X40 367 aaPredicted RBP4.33□□□□□ -1.72
SPG11-220ENST00000559933 GVQW1Q8N7I0 195 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 TMEM185AQ8NFB2 350 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 Q8NFD4 153 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 OR10R2Q8NGX6 335 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 OR10Z1Q8NGY1 313 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 OR4K15Q8NH41 348 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ANGPTL6Q8NI99 470 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CCDC107Q8WV48 283 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 RAB3CQ96E17 227 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 COQ2Q96H96 371 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 LURAP1Q96LR2 239 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 TSC22D3Q99576 134 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 DPCDQ9BVM2 203 aaPredicted RBP4.33□□□□□ -1.72
SPG11-220ENST00000559933 SRRQ9GZT4 340 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ABCG5Q9H222 651 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 TMPRSS5Q9H3S3 457 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 CXorf56Q9H5V9 222 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 GHRLQ9UBU3 117 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ZNF230Q9UIE0 474 aaPredicted RBP4.33□□□□□ -1.72
SPG11-220ENST00000559933 PPIAL4AQ9Y536 164 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 MAB21L2Q9Y586 359 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 PEX16Q9Y5Y5 336 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 NPTNQ9Y639 398 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 ITPR2Q14571 2701 aa4.33□□□□□ -1.72
SPG11-220ENST00000559933 IGKV1D-8A0A087WSZ0 117 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 IGHV4-61A0A0C4DH41 118 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 FABP12A6NFH5 140 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 TNFRSF13BO14836 293 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 PHF1O43189 567 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 ADAM20O43506 726 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 XRCC3O43542 346 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 ZNF780AO75290 641 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 ZNF737O75373 536 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 APOA1P02647 267 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 S100A5P33763 92 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 CFHR2P36980 270 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 GPR6P46095 362 aaPredicted RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 GLIPR1P48060 266 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 RIPPLY3P57055 190 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 SUMO1P63165 101 aaKnown RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 AESQ08117 197 aa4.32□□□□□ -1.72
SPG11-220ENST00000559933 DYNC1I2Q13409 638 aaKnown RBP4.32□□□□□ -1.72
SPG11-220ENST00000559933 IL13RA2Q14627 380 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms