RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 KCNG3Q8TAE7 436 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 KCTD7Q96MP8 289 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 MRPS26Q9BYN8 205 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 METTL8Q9H825 291 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 LINC00312Q9Y6C7 94 aa16.62■□□□□ 0.25
TSPAN3-207ENST00000559494 ODAMA1E959 279 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FUOMA2VDF0 154 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 SMIM30A4D0T7 59 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A10PA6NDY2 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A18PA6NE21 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A16PA6NEW6 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A20PA6NIJ5 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A8PA6NJQ4 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A7PA6NKC0 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 IFITM5A6NNB3 132 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A22PA8MWA6 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A12PA8MX19 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A5PA8MXJ8 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A23PA8MXZ1 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 RNASEK-C17orf49H0YIS7 233 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 IFNA2P01563 188 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A15PP0C7V4 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A13PP0C7W8 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A14PP0C7W9 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM90A24PP0C7X0 464 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 ARSBP15848 533 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FPR2P25090 351 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 RPS27AP62979 156 aaKnown RBP16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 KLRD1Q13241 179 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 TUSC1Q2TAM9 212 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 C2orf76Q3KRA6 126 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 RSBN1Q5VWQ0 802 aaPredicted RBP16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 RUSC1-AS1Q66K80 236 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 TPRA1Q86W33 373 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 CORO2AQ92828 525 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 FAM3DQ96BQ1 224 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 CYYR1Q96J86 154 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 MS4A7Q9GZW8 240 aaPredicted RBP16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 OCEL1Q9H607 264 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 RCC2Q9P258 522 aaKnown RBP16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 STEAP1Q9UHE8 339 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 ATRQ13535 2644 aa16.61■□□□□ 0.25
TSPAN3-207ENST00000559494 IGHV1-69DA0A0B4J2H0 117 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 IGHV1-69P01742 117 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 CFPP27918 469 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 SDC2P34741 201 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 KCNJ3P48549 501 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 HCP5Q6MZN7 132 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 GDPGP1Q6ZNW5 385 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 C9orf139Q6ZV77 190 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 OR2W3Q7Z3T1 314 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 ZNF714Q96N38 554 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 SLC6A7Q99884 636 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 TM2D1Q9BX74 207 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 TMEM59Q9BXS4 323 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 BARHL1Q9BZE3 327 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 NCOR1P1Q9H4R4 102 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 FBLN5Q9UBX5 448 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 KIF25Q9UIL4 384 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 UBE2J1Q9Y385 318 aaPredicted RBP16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 PEX16Q9Y5Y5 336 aa16.6■□□□□ 0.25
TSPAN3-207ENST00000559494 LDLRAD4O15165 306 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 CLEC2LP0C7M8 214 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 FUT3P21217 361 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 BPIFB3P59826 476 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 PAX5Q02548 391 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 PLA2G7Q13093 441 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 SCGB2A2Q13296 93 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 RAB12Q6IQ22 244 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 OR13F1Q8NGS4 319 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 NICN1Q9BSH3 213 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 LPAR5Q9H1C0 372 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 SPACA1Q9HBV2 294 aa16.59■□□□□ 0.25
TSPAN3-207ENST00000559494 TRGV10A0A0A0MS01 117 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A0A6YYD4 124 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A0B4J203 849 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 hCG_1809904A0A1W2PP81 198 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A1W2PPE2 198 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A1W2PR64 198 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A1W2PRV1 198 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 NOTOA8MTQ0 251 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 AIPO00170 330 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 AIREO43918 545 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 TFAP2AP05549 437 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 CGB3P0DN86 165 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 CGB7P0DN87 165 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 SLC2A2P11168 524 aaPredicted RBP16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 TGFBR1P36897 503 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 TIMM50Q3ZCQ8 353 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 SLC35E4Q6ICL7 350 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 TRAPPC6BQ86SZ2 158 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 PNKDQ8N490 385 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 PIP4P2Q8N4L2 257 aa16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 ZNF48Q96MX3 618 aaPredicted RBP16.58■□□□□ 0.24
TSPAN3-207ENST00000559494 MEIKINA0A087WXM9 373 aa16.57■□□□□ 0.24
TSPAN3-207ENST00000559494 TRAV39A0A0B4J263 110 aa16.57■□□□□ 0.24
TSPAN3-207ENST00000559494 TMEM272A0A1B0GTI8 110 aa16.57■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A1W2PRD5 423 aa16.57■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A1W2PRF3 423 aa16.57■□□□□ 0.24
TSPAN3-207ENST00000559494 A0A1W2PRM7 423 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms