RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ATAD3CQ5T2N8 411 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 ELP2Q6IA86 826 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 NANOGP1Q8N7R0 232 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 ZNF485Q8NCK3 441 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 OR11H6Q8NGC7 330 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 LINC01006Q8NI28 216 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 THRSPQ92748 146 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 COQ2Q96H96 371 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 TMED9Q9BVK6 235 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 BARHL1Q9BZE3 327 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 CCDC90BQ9GZT6 254 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 MEGF9Q9H1U4 602 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 PCDHB16Q9NRJ7 776 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 TAS2R3Q9NYW6 316 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 OR6C3Q9NZP0 311 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 KIF25Q9UIL4 384 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 MRPS28Q9Y2Q9 187 aaKnown RBP6.64□□□□□ -1.35
SNX1-207ENST00000559401 TPRKBQ9Y3C4 175 aa6.64□□□□□ -1.35
SNX1-207ENST00000559401 TRBV5-7A0A0A0MS05 114 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 TRAV24A0A0B4J272 114 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 A0A1W2PP11 408 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 ZNF729A6NN14 1252 aaPredicted RBP6.63□□□□□ -1.35
SNX1-207ENST00000559401 GEMIN2O14893 280 aaKnown RBP6.63□□□□□ -1.35
SNX1-207ENST00000559401 ZNF780AO75290 641 aaPredicted RBP6.63□□□□□ -1.35
SNX1-207ENST00000559401 HSMCR30P0CW71 290 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 GTF2F2P13984 249 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 IGFBP3P17936 291 aaPredicted RBP6.63□□□□□ -1.35
SNX1-207ENST00000559401 GABRA5P31644 462 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 RAB13P51153 203 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 RBM11P57052 281 aaKnown RBP6.63□□□□□ -1.35
SNX1-207ENST00000559401 GPR176Q14439 515 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 SPHARQ15513 63 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 AANATQ16613 207 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 MINOS1Q5TGZ0 78 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 AWAT2Q6E213 333 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 SLC35E4Q6ICL7 350 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 GLIPR1L1Q6UWM5 242 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 IZUMO2Q6UXV1 221 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 BAIAP2L2Q6UXY1 529 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 HEPN1Q6WQI6 88 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 TMEM219Q86XT9 240 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 DYNAPQ8N1N2 210 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 ABHD12Q8N2K0 398 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 ZNF565Q8N9K5 539 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 SUMF2Q8NBJ7 301 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 OR51T1Q8NGJ9 327 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 OR2T6Q8NHC8 308 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 PLPPR1Q8TBJ4 325 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 ZNF596Q8TC21 504 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 MRGPRDQ8TDS7 321 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 SGCDQ92629 289 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 MALSU1Q96EH3 234 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 AJUBAQ96IF1 538 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 DERL3Q96Q80 235 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 OR5M11Q96RB7 305 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 DPCDQ9BVM2 203 aaPredicted RBP6.63□□□□□ -1.35
SNX1-207ENST00000559401 NPFFR1Q9GZQ6 430 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 TCF7L1Q9HCS4 588 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 FKBP14Q9NWM8 211 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 CALYQ9NYX4 217 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 IL36GQ9NZH8 169 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 PITPNC1Q9UKF7 332 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 MINOS1-NBL1R4GNA1 71 aa6.63□□□□□ -1.35
SNX1-207ENST00000559401 TRAV39A0A0B4J263 110 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 FAM90A8PA6NJQ4 464 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 H3BUI4 141 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 RGS10O43665 173 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CHST1O43916 411 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CRTAPO75718 401 aaPredicted RBP6.62□□□□□ -1.35
SNX1-207ENST00000559401 TSPAN9O75954 239 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CD1AP06126 327 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 JUNBP17275 347 aaPredicted RBP6.62□□□□□ -1.35
SNX1-207ENST00000559401 MYF6P23409 242 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 GDNFP39905 211 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CEACAM3P40198 252 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 KCNJ3P48549 501 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 HSPA13P48723 471 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 ARHGDIBP52566 201 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 PRRX1P54821 245 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 PROK1P58294 105 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 BDH1Q02338 343 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 DOC2BQ14184 412 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 MPV17LQ2QL34 196 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 ACSM3Q53FZ2 586 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 RBM48Q5RL73 367 aaKnown RBP6.62□□□□□ -1.35
SNX1-207ENST00000559401 LDLRAD2Q5SZI1 272 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 ASCL4Q6XD76 172 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 LIAT1Q6ZQX7 453 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 LINC00596Q86U02 117 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 RTN4RL2Q86UN3 420 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 MS4A15Q8N5U1 240 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 NKAIN3Q8N8D7 197 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 OR13A1Q8NGR1 328 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 RFESDQ8TAC1 157 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CAPSLQ8WWF8 208 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CORO2AQ92828 525 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 UFD1Q92890 307 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 LEAP2Q969E1 77 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CNBD2Q96M20 576 aa6.62□□□□□ -1.35
SNX1-207ENST00000559401 CDCA4Q9BXL8 241 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms