RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 GIMAP1Q8WWP7 306 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 MBD6Q96DN6 1003 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 MED30Q96HR3 178 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 PRRT1Q99946 306 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 CMSS1Q9BQ75 279 aaKnown RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 HDHD3Q9BSH5 251 aaPredicted RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 FN3KRPQ9HA64 309 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 BEX4Q9NWD9 120 aaPredicted RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 TREM2Q9NZC2 230 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 PDZD2O15018 2839 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 IGHV1-69-2A0A0G2JMI3 117 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 BOLA2-SMG1P6H3BVE0 249 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 AMY2BP19961 511 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 RRAS2P62070 204 aaPredicted RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 MRPS11P82912 194 aaKnown RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 BRICD5Q6PL45 260 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 WDR82Q6UXN9 313 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 POC1AQ8NBT0 407 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 OR6F1Q8NGZ6 308 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 ST6GALNAC5Q9BVH7 336 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 SPACA1Q9HBV2 294 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 HES4Q9HCC6 221 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 C1orf123Q9NWV4 160 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 ZNF230Q9UIE0 474 aaPredicted RBP13.88□□□□□ -0.19
TPM1-219ENST00000559397 PPP1R3CQ9UQK1 317 aa13.88□□□□□ -0.19
TPM1-219ENST00000559397 A6NLC8 198 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 LYNX1G3V0Z9 82 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 RP2O75695 350 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 CCNKO75909 580 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 PMP2P02689 132 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 GLAP06280 429 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 LYNX1P0DP58 116 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 DAOP14920 347 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 TAS2R46P59540 309 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 DEFB113Q30KQ7 82 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 SLC36A1Q7Z2H8 476 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 ARRDC1Q8N5I2 433 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 RDH5Q92781 318 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 OR51J1Q9H342 316 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 DCAF16Q9NXF7 216 aa13.87□□□□□ -0.19
TPM1-219ENST00000559397 IGKV1D-8A0A087WSZ0 117 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 UBE2QL1A1L167 161 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 FCGR3AP08637 254 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 CFHR2P36980 270 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 ATP5J2P56134 94 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 IKZF1Q13422 519 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 ATAD3CQ5T2N8 411 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 Q6P435 159 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 OR5AP2Q8NGF4 316 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 OR5H2Q8NGV7 314 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 MRGPRFQ96AM1 343 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 PERPQ96FX8 193 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 ST6GAL2Q96JF0 529 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 ALX4Q9H161 411 aaPredicted RBP13.86□□□□□ -0.19
TPM1-219ENST00000559397 MYOZ1Q9NP98 299 aaPredicted RBP13.86□□□□□ -0.19
TPM1-219ENST00000559397 TMEM106BQ9NUM4 274 aa13.86□□□□□ -0.19
TPM1-219ENST00000559397 ANKRD17O75179 2603 aaKnown RBP13.86□□□□□ -0.19
TPM1-219ENST00000559397 LHBP01229 141 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 IFNA6P05013 189 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 CSN2P05814 226 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 ANXA7P20073 488 aaKnown RBP13.85□□□□□ -0.19
TPM1-219ENST00000559397 DUSP1P28562 367 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 ZNF146Q15072 292 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 METTL11BQ5VVY1 283 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 GLDNQ6ZMI3 551 aaPredicted RBP13.85□□□□□ -0.19
TPM1-219ENST00000559397 OR10Z1Q8NGY1 313 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 MAFIPQ8WZ33 124 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 CCL17Q92583 94 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 DYRK2Q92630 601 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 BEX2Q9BXY8 128 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 BEX1Q9HBH7 125 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 BARX1Q9HBU1 254 aaPredicted RBP13.85□□□□□ -0.19
TPM1-219ENST00000559397 C12orf4Q9NQ89 552 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 DLL4Q9NR61 685 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 ZNF221Q9UK13 617 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 ARID1AO14497 2285 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 TRAV24A0A0B4J272 114 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 CEACAM18A8MTB9 384 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 C3orf80F5H4A9 247 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 NAPSAO96009 420 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 CYB5R3P00387 301 aaPredicted RBP13.85□□□□□ -0.19
TPM1-219ENST00000559397 VSIG10L2P0DP72 767 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 MRPS15P82914 257 aaKnown RBP13.85□□□□□ -0.19
TPM1-219ENST00000559397 HOXA4Q00056 320 aaPredicted RBP13.85□□□□□ -0.19
TPM1-219ENST00000559397 SRSF7Q16629 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
TPM1-219ENST00000559397 HFEQ30201 348 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 Q6ZPA2 131 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 OVCH2Q7RTZ1 564 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 LRRC75A-AS1Q8N1F1 130 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 GCSAMQ8N6F7 178 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 ZDHHC22Q8N966 263 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 OR11L1Q8NGX0 322 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 RNF7Q9UBF6 113 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 ANXA10Q9UJ72 324 aa13.85□□□□□ -0.19
TPM1-219ENST00000559397 hCG_1807616A0A1W2PRN6 198 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 OR2AT4A6NND4 320 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 SNRPGP15A8MWD9 76 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 TMEM178BH3BS89 294 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 IFNL4K9M1U5 179 aa13.84□□□□□ -0.19
TPM1-219ENST00000559397 NXPH2O95156 264 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms