RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 AANATQ16613 207 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF672Q499Z4 452 aaPredicted RBP13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ALKAL2Q6UX46 152 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 FBXW12Q6X9E4 464 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 KCTD9Q7L273 389 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 PXT1Q8NFP0 134 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 CISD1Q9NZ45 108 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 EHFQ9NZC4 300 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 SPEF1Q9Y4P9 236 aa13.45□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF816-ZNF321PA0A0X1KG74 233 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 SHOXO15266 292 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 SUPT4H1P63272 117 aaKnown RBP13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 CHRFAM7AQ494W8 412 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 OR2T2Q6IF00 324 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 RGS7BPQ6MZT1 257 aaPredicted RBP13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 OR5L1Q8NGL2 311 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 MAFIPQ8WZ33 124 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 MRPS24Q96EL2 167 aaKnown RBP13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 MRPL37Q9BZE1 423 aaKnown RBP13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 NMES1Q9C002 83 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 EDARQ9UNE0 448 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 AKAP6Q13023 2319 aa13.44□□□□□ -0.26
CDC42BPB-204ENST00000559043 SDCBPO00560 298 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 MST1LQ2TV78 715 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 MBNL2Q5VZF2 373 aaKnown RBP13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZSCAN4Q8NAM6 433 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 SYT3Q9BQG1 590 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 DUSP13Q9UII6 198 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 IGKV1D-8A0A087WSZ0 117 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 IGKV1-12A0A0C4DH73 117 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 RNF222A6NCQ9 220 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 FAM25EA8MYX2 175 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 IGKV1D-12P01611 117 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 OR4A8P0C604 315 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 RPS2P15880 293 aaKnown RBP13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 SERPINF1P36955 418 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 ECI1P42126 302 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 MALLQ13021 153 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 PDZK1IP1Q13113 114 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 TAF9Q16594 264 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF718Q3SXZ3 478 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 LRRC37A5PQ49AS3 106 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 ACOT7LQ6ZUV0 252 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 CCDC28AQ8IWP9 274 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF442Q9H7R0 627 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 RAB18Q9NP72 206 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 DECR2Q9NUI1 292 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF701Q9NV72 531 aaPredicted RBP13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 SLC7A11Q9UPY5 501 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 NBPF19A0A087WUL8 3843 aa13.43□□□□□ -0.26
CDC42BPB-204ENST00000559043 IGLV3-9A0A075B6K5 115 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 RAC2P15153 192 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 DTYMKP23919 212 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 CHATP28329 748 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 UBA52P62987 128 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 CYCSP99999 105 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 NKAPLQ5M9Q1 402 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 MRPL21Q7Z2W9 205 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 BHLHE23Q8NDY6 225 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 GTF3AQ92664 365 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 MRPL24Q96A35 216 aaKnown RBP13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 FAAP24Q9BTP7 215 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 RDH8Q9NYR8 311 aa13.42□□□□□ -0.26
CDC42BPB-204ENST00000559043 TRBV6-7A0A0A0MS04 114 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 hCG_1807616A0A1W2PRN6 198 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 CD300LBA8K4G0 201 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 I3L521 148 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 BCL2L11O43521 198 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 PI3P19957 117 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 PSMB6P28072 239 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 BAMBIQ13145 260 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 ZNF787Q6DD87 383 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 UNQ6126/PRO20091Q6UXV3 157 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 MOB3CQ70IA8 216 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 OSR2Q8N2R0 312 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 OR56B2PQ8NGI1 322 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 COQ8AQ8NI60 647 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 THAP6Q8TBB0 222 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 PIGCQ92535 297 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 VRK1Q99986 396 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 HDHD3Q9BSH5 251 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 PLEKHF2Q9H8W4 249 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 AK3Q9UIJ7 227 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 ANXA10Q9UJ72 324 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 PURGQ9UJV8 347 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 C5orf51A6NDU8 294 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 MFSD2BA6NFX1 497 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 SPDEFO95238 335 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 PLATP00750 562 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 IGHV3-13P01766 116 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 TUBG1P23258 451 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 GLRA1P23415 457 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 APOBEC3AP31941 199 aaPredicted RBP13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 PLCXD3Q63HM9 321 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 Q6ZR03 302 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 C1orf174Q8IYL3 243 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 ST8SIA2Q92186 375 aa13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 RBPMSQ93062 196 aaKnown RBP13.41□□□□□ -0.26
CDC42BPB-204ENST00000559043 POM121Q96HA1 1249 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms