RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 OR13C5Q8NGS8 318 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 PP6455Q8WZ26 134 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 EMG1Q92979 244 aaKnown RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 TMEM80Q96HE8 168 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 CEP19Q96LK0 163 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 OPALINQ96PE5 141 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 NRIP2Q9BQI9 281 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 UQCC2Q9BRT2 126 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 DCTN5Q9BTE1 182 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 C8orf4Q9NR00 106 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 MRPS18AQ9NVS2 196 aaKnown RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 RBFOX1Q9NWB1 397 aaKnown RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 ZNF222Q9UK12 451 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 SIRT4Q9Y6E7 314 aaPredicted RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 CENPVL3A0A0U1RRI6 287 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 TMEM82A0PJX8 343 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 SLC1A7O00341 560 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 ECDO95905 644 aaPredicted RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 LALBAP00709 142 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 ISG15P05161 165 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 MMP9P14780 707 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 DCKP27707 260 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 ERVFRD-1P60508 538 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 COL10A1Q03692 680 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 DEFB112Q30KQ8 113 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 LAIR2Q6ISS4 152 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 SATL1Q86VE3 508 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 SERPINA12Q8IW75 414 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 SLC7A5P1Q8MH63 180 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 STX19Q8N4C7 294 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 ZDHHC22Q8N966 263 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 OCC1Q8TAD7 63 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 SIRPDQ9H106 197 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 GPN1Q9HCN4 374 aaPredicted RBP7.94□□□□□ -1.14
SPG11-214ENST00000558989 C19orf12Q9NSK7 152 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 ING3Q9NXR8 418 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 RASL12Q9NYN1 266 aa7.94□□□□□ -1.14
SPG11-214ENST00000558989 DNAJC9-AS1A6NH13 148 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 TMEM212A6NML5 194 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 TRIM77I1YAP6 450 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 M0QYG6 137 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 CYB5AP00167 134 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 PRKACAP17612 351 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 MPZP25189 248 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 C21orf33P30042 268 aaPredicted RBP7.93□□□□□ -1.14
SPG11-214ENST00000558989 NUP62P37198 522 aaPredicted RBP7.93□□□□□ -1.14
SPG11-214ENST00000558989 EDDM3BP56851 147 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 FAM3BP58499 235 aaPredicted RBP7.93□□□□□ -1.14
SPG11-214ENST00000558989 IL18R1Q13478 541 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 EDDM3AQ14507 147 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 CDK5R1Q15078 307 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 TPRX1Q8N7U7 411 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 UXS1Q8NBZ7 420 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 CCDC54Q8NEL0 328 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 RNASE8Q8TDE3 154 aaKnown RBP7.93□□□□□ -1.14
SPG11-214ENST00000558989 RGP1Q92546 391 aaPredicted RBP7.93□□□□□ -1.14
SPG11-214ENST00000558989 JMJD8Q96S16 334 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 NEU1Q99519 415 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 PKIBQ9C010 78 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 CTDSP1Q9GZU7 261 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 CHST6Q9GZX3 395 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 ZCCHC4Q9H5U6 513 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 TAS2R4Q9NYW5 299 aa7.93□□□□□ -1.14
SPG11-214ENST00000558989 DIMT1Q9UNQ2 313 aaKnown RBP7.93□□□□□ -1.14
SPG11-214ENST00000558989 EXOSC1Q9Y3B2 195 aaKnown RBP7.93□□□□□ -1.14
SPG11-214ENST00000558989 A0A1W2PPK0 400 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 IRGMA1A4Y4 181 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 SIRPB1O00241 398 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 UBA52P62987 128 aaKnown RBP7.92□□□□□ -1.14
SPG11-214ENST00000558989 RPL22L1Q6P5R6 122 aaKnown RBP7.92□□□□□ -1.14
SPG11-214ENST00000558989 CENPVQ7Z7K6 275 aaPredicted RBP7.92□□□□□ -1.14
SPG11-214ENST00000558989 CMTM4Q8IZR5 234 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 OR51A2Q8NGJ7 313 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 TFAP2CQ92754 450 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 C10orf35Q96D05 121 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 SDSLQ96GA7 329 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 GPER1Q99527 375 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 FAM192AQ9GZU8 254 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 DNTTIP1Q9H147 329 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 HES4Q9HCC6 221 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 GSTK1Q9Y2Q3 226 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 IGHV1-69DA0A0B4J2H0 117 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 IGKV1-12A0A0C4DH73 117 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 ZNF785A8K8V0 405 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 MYL12BO14950 172 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 HOXA3O43365 443 aaPredicted RBP7.92□□□□□ -1.14
SPG11-214ENST00000558989 IGKV1D-12P01611 117 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 IGHV1-69P01742 117 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 TMEM225BP0DP42 221 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 CCL3L1P16619 93 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 GABRR1P24046 479 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 PAX6P26367 422 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 PCP4P48539 62 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 CAV3P56539 151 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 ERVK11-1P61568 191 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 RPL31P62899 125 aaKnown RBP7.92□□□□□ -1.14
SPG11-214ENST00000558989 MED21Q13503 144 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 FHL3Q13643 280 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 DOC2BQ14184 412 aa7.92□□□□□ -1.14
SPG11-214ENST00000558989 ZNF782Q6ZMW2 699 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms