RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 SNX22Q96L94 193 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 OSBPL10Q9BXB5 764 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 GLS2Q9UI32 602 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 TCF19Q9Y242 345 aa5.9□□□□□ -1.46
SPG11-213ENST00000558988 IGHV2-26A0A0B4J1V2 119 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 IGKV1-9A0A0C4DH69 117 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 C17orf98A8MV24 154 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 SLC16A6O15403 523 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 MMP23AO75900 390 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 ATP5HO75947 161 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 HCKP08631 526 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 TMEM225BP0DP42 221 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 ATF1P18846 271 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 PRKACBP22694 351 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 KIR2DS4P43632 304 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 ZNF91Q05481 1191 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 KPNB1Q14974 876 aaKnown RBP5.89□□□□□ -1.47
SPG11-213ENST00000558988 ATXN7L3Q14CW9 347 aaPredicted RBP5.89□□□□□ -1.47
SPG11-213ENST00000558988 KHDC1LQ5JSQ8 128 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 LDLRAD2Q5SZI1 272 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 ZNF626Q68DY1 528 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 TCF23Q7RTU1 214 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 RNF144BQ7Z419 303 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 LHFPL3Q86UP9 236 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 OR51A4Q8NGJ6 313 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 PIFOQ8TCI5 191 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 TSEN15Q8WW01 171 aaKnown RBP5.89□□□□□ -1.47
SPG11-213ENST00000558988 CAPSLQ8WWF8 208 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 PP6455Q8WZ26 134 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 R3HDM4Q96D70 268 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 C4orf36Q96KX1 117 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 OPALINQ96PE5 141 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 NR1H4Q96RI1 486 aaPredicted RBP5.89□□□□□ -1.47
SPG11-213ENST00000558988 CDCA4Q9BXL8 241 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 RANBP3Q9H6Z4 567 aaPredicted RBP5.89□□□□□ -1.47
SPG11-213ENST00000558988 ZNF702PQ9H963 129 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 AMBNQ9NP70 447 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 EXOSC4Q9NPD3 245 aaKnown RBP5.89□□□□□ -1.47
SPG11-213ENST00000558988 TBL2Q9Y4P3 447 aaKnown RBP5.89□□□□□ -1.47
SPG11-213ENST00000558988 SESN1Q9Y6P5 492 aa5.89□□□□□ -1.47
SPG11-213ENST00000558988 DSCAML1Q8TD84 2053 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 TRGV10A0A0A0MS01 117 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 IGKV1-12A0A0C4DH73 117 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 TRBV2A0A0J9YWF9 115 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 A6NDX4 124 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 SH2D7A6NKC9 451 aaPredicted RBP5.88□□□□□ -1.47
SPG11-213ENST00000558988 ODF3BA8MYP8 253 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 SH2D1BO14796 132 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 OR2H2O95918 312 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 IGKV1D-12P01611 117 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 IGHV3-7P01780 117 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 CDK2P24941 298 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 NFYBP25208 207 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 GLP1RP43220 463 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 VDAC2P45880 294 aaPredicted RBP5.88□□□□□ -1.47
SPG11-213ENST00000558988 OR3A1P47881 315 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 GLIPR1P48060 266 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 SOX2P48431 317 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 P2RX3P56373 397 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 BLCAPP62952 87 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 MEF2CQ06413 473 aaPredicted RBP5.88□□□□□ -1.47
SPG11-213ENST00000558988 AESQ08117 197 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 PDZK1IP1Q13113 114 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 ZSCAN26Q16670 478 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 LTC4SQ16873 150 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 KIAA2026Q5HYC2 2103 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 C9orf152Q5JTZ5 239 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 TMEM244Q5VVB8 128 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 SATL1Q86VE3 508 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 Q8IYB0 196 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 ENTHD1Q8IYW4 607 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 CBR4Q8N4T8 237 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 ACBD7Q8N6N7 88 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 CITED2Q99967 270 aaPredicted RBP5.88□□□□□ -1.47
SPG11-213ENST00000558988 ALG8Q9BVK2 526 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 CLEC7AQ9BXN2 247 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 PRSS22Q9GZN4 317 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 FAM192AQ9GZU8 254 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 MMP28Q9H239 520 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 TMEM133Q9H2Q1 129 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 PITPNC1Q9UKF7 332 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 HHLA2Q9UM44 414 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 PCDHGB5Q9Y5G0 923 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 GMPPBQ9Y5P6 360 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 LINC00312Q9Y6C7 94 aa5.88□□□□□ -1.47
SPG11-213ENST00000558988 FAM90A8PA6NJQ4 464 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 VGLL3A8MV65 326 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 TOR1AO14656 332 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 MGST3O14880 152 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 DEGS1O15121 323 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 RBP4P02753 201 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 OPN1MWP04001 364 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 ALPLP05186 524 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 LPLP06858 475 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 CLEC2LP0C7M8 214 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 OPN1MW2P0DN77 364 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 OPN1MW3P0DN78 364 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 HTR1DP28221 377 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 OR3A4PP47883 348 aa5.87□□□□□ -1.47
SPG11-213ENST00000558988 TMED1Q13445 227 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms