RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 DUSP1P28562 367 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 CEACAM3P40198 252 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 PTGFRP43088 359 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 VDAC2P45880 294 aaPredicted RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 ALKBH1Q13686 389 aaKnown RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 HABP2Q14520 560 aaPredicted RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 KPNB1Q14974 876 aaKnown RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 NSUN5P1Q3KNT7 163 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 KHDC1LQ5JSQ8 128 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 NKAPLQ5M9Q1 402 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 PRAMEF5Q5TYX0 476 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 CCBE1Q6UXH8 406 aaPredicted RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 HEPN1Q6WQI6 88 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 C16orf82Q7Z2V1 217 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 RTN4RL2Q86UN3 420 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 SYS1Q8N2H4 156 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR4F17Q8NGA8 305 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR52N4Q8NGI2 321 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR51A4Q8NGJ6 313 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR5D18Q8NGL1 313 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR4P4Q8NGL7 312 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR10AC1Q8NH08 325 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 TSEN15Q8WW01 171 aaKnown RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 CREB3L1Q96BA8 519 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 OR4F4Q96R69 305 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 ALG8Q9BVK2 526 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 INPP5EQ9NRR6 644 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 SERTAD4Q9NUC0 356 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 C19orf73Q9NVV2 129 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 TAS2R3Q9NYW6 316 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.48□□□□□ -1.37
TRAF3-205ENST00000558700 HILPDAQ9Y5L2 63 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 GMPPBQ9Y5P6 360 aa6.48□□□□□ -1.37
TRAF3-205ENST00000558700 G3V4G9 280 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 H3BNX3 289 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 TMEM127O75204 238 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 LY86O95711 162 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 FADS2O95864 444 aaKnown RBP6.47□□□□□ -1.37
TRAF3-205ENST00000558700 CALCBP10092 127 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 CDK2P24941 298 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 CD34P28906 385 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 BRS3P32247 399 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 RAB13P51153 203 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 BDH1Q02338 343 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 EMX1Q04741 257 aaPredicted RBP6.47□□□□□ -1.37
TRAF3-205ENST00000558700 CD69Q07108 199 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 BEAN1Q3B7T3 259 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 ZIK1Q3SY52 487 aaPredicted RBP6.47□□□□□ -1.37
TRAF3-205ENST00000558700 LDLRAD2Q5SZI1 272 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 KPRPQ5T749 579 aaPredicted RBP6.47□□□□□ -1.37
TRAF3-205ENST00000558700 C10orf67Q8IYJ2 551 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 ABHD12Q8N2K0 398 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 CBR4Q8N4T8 237 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 OR4D6Q8NGJ1 314 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 OR5D14Q8NGL3 314 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 RAB24Q969Q5 203 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 R3HDM4Q96D70 268 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 LGALS12Q96DT0 336 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 Q96MT0 163 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 SPACA5Q96QH8 159 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 C9orf16Q9BUW7 83 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 ZCCHC4Q9H5U6 513 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 OR6C3Q9NZP0 311 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 DPM3Q9P2X0 92 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 DHDHQ9UQ10 334 aa6.47□□□□□ -1.37
TRAF3-205ENST00000558700 EXOGQ9Y2C4 368 aaKnown RBP6.47□□□□□ -1.37
TRAF3-205ENST00000558700 IGKV1-12A0A0C4DH73 117 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 ODAMA1E959 279 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF729A6NN14 1252 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 FAM90A22PA8MWA6 464 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 LEUTXA8MZ59 168 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 OOSP1A8MZH6 123 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 E9PQ18 207 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 M0QZK8 103 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 SLC33A1O00400 549 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 TOR1AO14656 332 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 MMP23AO75900 390 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 ZFPL1O95159 310 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 IGKV1D-12P01611 117 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 CSTBP04080 98 aaKnown RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 TMEM225BP0DP42 221 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 CD28P10747 220 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 JUNBP17275 347 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 MALP21145 153 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 LMO1P25800 156 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 GLP1RP43220 463 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 GLIPR1P48060 266 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 GBX2P52951 348 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 ZP1P60852 638 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 SCN1BQ07699 218 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 AESQ08117 197 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 RAB40BQ12829 278 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 PMS2P11Q13670 270 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 ATXN7L3Q14CW9 347 aaPredicted RBP6.46□□□□□ -1.38
TRAF3-205ENST00000558700 HLA-DRB5Q30154 266 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 C19orf54Q5BKX5 351 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 KRBOX4Q5JUW0 171 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF691Q5VV52 312 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 LPCAT4Q643R3 524 aa6.46□□□□□ -1.38
TRAF3-205ENST00000558700 CCDC144NLQ6NUI1 221 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms