RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PDCD5O14737 125 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 LDLRAD4O15165 306 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 CRTAPO75718 401 aaPredicted RBP12.71□□□□□ -0.37
LINC01220-201ENST00000558575 OR7C1O76099 320 aaPredicted RBP12.71□□□□□ -0.37
LINC01220-201ENST00000558575 BPNT1O95861 308 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 IGHV4-38-2P0DP08 117 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 MYL9P24844 172 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 ERP29P30040 261 aaKnown RBP12.71□□□□□ -0.37
LINC01220-201ENST00000558575 GLIPR1P48060 266 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.37
LINC01220-201ENST00000558575 EDDM3AQ14507 147 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 RAB11BQ15907 218 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 GDPGP1Q6ZNW5 385 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 FAM185AQ8N0U4 392 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 SUMF2Q8NBJ7 301 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 PLPPR1Q8TBJ4 325 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 TNFRSF14Q92956 283 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 FAM3DQ96BQ1 224 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 FUNDC2Q9BWH2 189 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 RCC2Q9P258 522 aaKnown RBP12.71□□□□□ -0.37
LINC01220-201ENST00000558575 SOX21Q9Y651 276 aaPredicted RBP12.71□□□□□ -0.37
LINC01220-201ENST00000558575 KPTNQ9Y664 436 aa12.71□□□□□ -0.37
LINC01220-201ENST00000558575 A0A0A6YYD4 124 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 A0A0B4J203 849 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 A0A1W2PQ09 198 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 HSPB6O14558 160 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 AIREO43918 545 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 TOX4O94842 621 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 MPIG6BO95866 241 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 CSN2P05814 226 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 SLC2A2P11168 524 aaPredicted RBP12.7□□□□□ -0.38
LINC01220-201ENST00000558575 CCL3L1P16619 93 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 P2RX3P56373 397 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 EDDM3BP56851 147 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 HILS1P60008 231 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 RPS27AP62979 156 aaKnown RBP12.7□□□□□ -0.38
LINC01220-201ENST00000558575 MPV17LQ2QL34 196 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 PAN3Q58A45 887 aaKnown RBP12.7□□□□□ -0.38
LINC01220-201ENST00000558575 C1orf122Q6ZSJ8 110 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 LINC00596Q86U02 117 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 TPRA1Q86W33 373 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 KIR3DL3Q8N743 410 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 KCNG3Q8TAE7 436 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 PPP1R35Q8TAP8 253 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 PCGF1Q9BSM1 259 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 DPCDQ9BVM2 203 aaPredicted RBP12.7□□□□□ -0.38
LINC01220-201ENST00000558575 NAA50Q9GZZ1 169 aaKnown RBP12.7□□□□□ -0.38
LINC01220-201ENST00000558575 ONECUT1Q9UBC0 465 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 FBLN5Q9UBX5 448 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 STEAP1Q9UHE8 339 aa12.7□□□□□ -0.38
LINC01220-201ENST00000558575 IGHV3OR16-10A0A075B7F0 116 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 CENPVL3A0A0U1RRI6 287 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 ARSBP15848 533 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 LSM3P62310 102 aaKnown RBP12.69□□□□□ -0.38
LINC01220-201ENST00000558575 MXD1Q05195 221 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 MEF2CQ06413 473 aaPredicted RBP12.69□□□□□ -0.38
LINC01220-201ENST00000558575 ATXN7L3Q14CW9 347 aaPredicted RBP12.69□□□□□ -0.38
LINC01220-201ENST00000558575 TUSC1Q2TAM9 212 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 METTL11BQ5VVY1 283 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 SHISA2Q6UWI4 295 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 RTN4RL2Q86UN3 420 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 NICN1Q9BSH3 213 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 TM2D1Q9BX74 207 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 CST11Q9H112 138 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 LPAR5Q9H1C0 372 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 ING3Q9NXR8 418 aa12.69□□□□□ -0.38
LINC01220-201ENST00000558575 TMEM272A0A1B0GTI8 110 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A10PA6NDY2 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A7PA6NKC0 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FOXI3A8MTJ6 420 aaPredicted RBP12.68□□□□□ -0.38
LINC01220-201ENST00000558575 NOTOA8MTQ0 251 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 C17orf98A8MV24 154 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A23PA8MXZ1 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 TRIM77I1YAP6 450 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 M0R1W7 72 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 AIPO00170 330 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 CGB3P0DN86 165 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 CGB7P0DN87 165 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 PRTN3P24158 256 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 PAX5Q02548 391 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 KRBOX4Q5JUW0 171 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 ATAD3CQ5T2N8 411 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 RSBN1Q5VWQ0 802 aaPredicted RBP12.68□□□□□ -0.38
LINC01220-201ENST00000558575 HCP5Q6MZN7 132 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 OR2W3Q7Z3T1 314 aa12.68□□□□□ -0.38
LINC01220-201ENST00000558575 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms