RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 IGHG4P01861 327 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 KRT8P05787 483 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 GP9P14770 177 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 PRKACBP22694 351 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 C21orf33P30042 268 aaPredicted RBP13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 LTC4SQ16873 150 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 TMEM65Q6PI78 240 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 LHFPL2Q6ZUX7 228 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 DHFR2Q86XF0 187 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 OR2T10Q8NGZ9 312 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 COQ2Q96H96 371 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 ELAC2Q9BQ52 826 aaKnown RBP13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 IDI2-AS1Q9NZ38 188 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 MRM2Q9UI43 246 aaKnown RBP13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 PSG11Q9UQ72 335 aa13.9□□□□□ -0.18
TSPAN3-204ENST00000558394 HSD17B6O14756 317 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 LDLRAD4O15165 306 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 GAPDHP04406 335 aaKnown RBP13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 OR5H8P0DN80 308 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 SPNP16150 400 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 GABPB1Q06547 395 aaPredicted RBP13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 ZNF616Q08AN1 781 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 PDZK1IP1Q13113 114 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 EAF1Q96JC9 268 aaPredicted RBP13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 TM2D3Q9BRN9 247 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 COMMD4Q9H0A8 199 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 GHITMQ9H3K2 345 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 SLC25A19Q9HC21 320 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 CALYQ9NYX4 217 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 CSMD3Q7Z407 3707 aa13.89□□□□□ -0.19
TSPAN3-204ENST00000558394 IGHV3-72A0A0B4J1Y9 119 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 OVOL1O14753 267 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 DEGS1O15121 323 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 RAP2AP10114 183 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 EBI3Q14213 229 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 CATSPERDQ86XM0 798 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 Q8N9W7 124 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 OR6Q1Q8NGQ2 317 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 PRRG3Q9BZD7 231 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 PPIL3Q9H2H8 161 aaKnown RBP13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 EDA2RQ9HAV5 297 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 NEK6Q9HC98 313 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 CLN6Q9NWW5 311 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 TAGLN3Q9UI15 199 aa13.88□□□□□ -0.19
TSPAN3-204ENST00000558394 MEIKINA0A087WXM9 373 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 IGHV1-3A0A0C4DH29 117 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 SLC33A1O00400 549 aaPredicted RBP13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 PSMB8P28062 276 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 SRSF7Q16629 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 DCUN1D4Q92564 292 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 RFT1Q96AA3 541 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 LRGUKQ96M69 825 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 KCTD7Q96MP8 289 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 RHOFQ9HBH0 211 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 ADGRL4Q9HBW9 690 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 MED4Q9NPJ6 270 aa13.87□□□□□ -0.19
TSPAN3-204ENST00000558394 TRIM64CA6NLI5 447 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 HSPB6O14558 160 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 IL1AP01583 271 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 ANXA8P13928 327 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 ZNF20P17024 532 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 ATF1P18846 271 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 SOX6P35712 828 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 REG1BP48304 166 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 VEGFCP49767 419 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 ISL1P61371 349 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 ZNF816Q0VGE8 651 aaPredicted RBP13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 SLC16A12Q6ZSM3 486 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 IZUMO1Q8IYV9 350 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 SPSB1Q96BD6 273 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 OPALINQ96PE5 141 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 OR5B12Q96R08 314 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 TBX5Q99593 518 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 OSBPL10Q9BXB5 764 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 BARHL1Q9BZE3 327 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 VSIG4Q9Y279 399 aa13.86□□□□□ -0.19
TSPAN3-204ENST00000558394 LOC107986453A0A1B0GWG9 222 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 KDM4BO94953 1096 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 UBCP0CG48 685 aaKnown RBP13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 ZP1P60852 638 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 CFHR3Q02985 330 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 Q6P435 159 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 TMEM179BQ7Z7N9 219 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 OR13A1Q8NGR1 328 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 RFESDQ8TAC1 157 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 S1PR3Q99500 378 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 GNB4Q9HAV0 340 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 KIF25Q9UIL4 384 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 HYDINQ4G0P3 5121 aa13.85□□□□□ -0.19
TSPAN3-204ENST00000558394 IGKV1-9A0A0C4DH69 117 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 IGKV1-12A0A0C4DH73 117 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 A0A1W2PPE3 182 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 METTL15A6NJ78 407 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 I3L521 148 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 MOSP00540 346 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 IGKV1D-12P01611 117 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 CGB3P0DN86 165 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 CGB7P0DN87 165 aa13.84□□□□□ -0.19
TSPAN3-204ENST00000558394 PRKACGP22612 351 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms