RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ARL6IP1Q15041 203 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 RAB12Q6IQ22 244 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 FGFRL1Q8N441 504 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 NDNFQ8TB73 568 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 DACT3Q96B18 629 aaPredicted RBP8.66□□□□□ -1.02
LRRC28-204ENST00000558172 CMTM3Q96MX0 182 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 CHST6Q9GZX3 395 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 RBM38Q9H0Z9 239 aaKnown RBP8.66□□□□□ -1.02
LRRC28-204ENST00000558172 PPA2Q9H2U2 334 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 KCNK15Q9H427 330 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 MMP26Q9NRE1 261 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 RSL24D1Q9UHA3 163 aaKnown RBP8.66□□□□□ -1.02
LRRC28-204ENST00000558172 HSF4Q9ULV5 492 aa8.66□□□□□ -1.02
LRRC28-204ENST00000558172 SONP18583 2426 aaKnown RBP8.65□□□□□ -1.02
LRRC28-204ENST00000558172 A0A0B4J203 849 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 A0A1W2PQ09 198 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 A8MV72 311 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-204ENST00000558172 C22orf46C9J442 243 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 SOCS1O15524 211 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 PAHP00439 452 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 CHATP28329 748 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 P2RX3P56373 397 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 PAX8Q06710 450 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 AESQ08117 197 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 SPCS2Q15005 226 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 KRBOX4Q5JUW0 171 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 SIGIRRQ6IA17 410 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 SLC35E4Q6ICL7 350 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 FAHD2BQ6P2I3 314 aaPredicted RBP8.65□□□□□ -1.02
LRRC28-204ENST00000558172 MZT2AQ6P582 158 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 C1orf122Q6ZSJ8 110 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 Q6ZTK2 550 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 CMTM4Q8IZR5 234 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 BPIFB2Q8N4F0 458 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 TEX29Q8N6K0 151 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 LGALS14Q8TCE9 139 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 NEK7Q8TDX7 302 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 PHF21AQ96BD5 680 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 DGCR14Q96DF8 476 aaKnown RBP8.65□□□□□ -1.02
LRRC28-204ENST00000558172 FAHD2AQ96GK7 314 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 NICN1Q9BSH3 213 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 ATG5Q9H1Y0 275 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 YAE1D1Q9NRH1 226 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 PLEKHJ1Q9NW61 149 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 TMEM160Q9NX00 188 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 RHBDL2Q9NX52 303 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 OR6C3Q9NZP0 311 aa8.65□□□□□ -1.02
LRRC28-204ENST00000558172 NAV3Q8IVL0 2385 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 TRGV10A0A0A0MS01 117 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 A0A0A6YYD4 124 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 A0A0A6YYH2 397 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 hCG_1809904A0A1W2PP81 198 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 A0A1W2PPE2 198 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 A0A1W2PR64 198 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 A0A1W2PRV1 198 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 A6NJ64 397 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 FOXI3A8MTJ6 420 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-204ENST00000558172 M0R1W7 72 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 HSPB6O14558 160 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 EFNB2P52799 333 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 TMEM50BP56557 158 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 PLA2G7Q13093 441 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 EDDM3AQ14507 147 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 ATXN7L3Q14CW9 347 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-204ENST00000558172 NKAPLQ5M9Q1 402 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 METTL11BQ5VVY1 283 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 RSBN1Q5VWQ0 802 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-204ENST00000558172 TMEM200BQ69YZ2 307 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 FAM185AQ8N0U4 392 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 KIR3DL3Q8N743 410 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF565Q8N9K5 539 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 OR4M1Q8NGD0 313 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 OR5H6Q8NGV6 325 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 OR10R2Q8NGX6 335 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 DYNC2LI1Q8TCX1 351 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 CORO2AQ92828 525 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 RAB3CQ96E17 227 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 S100A16Q96FQ6 103 aaKnown RBP8.64□□□□□ -1.03
LRRC28-204ENST00000558172 COQ2Q96H96 371 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 SMR3AQ99954 134 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 ABCG5Q9H222 651 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 RIMS4Q9H426 269 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-204ENST00000558172 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 C19orf12Q9NSK7 152 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 ETAA1Q9NY74 926 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 CCDC59Q9P031 241 aaKnown RBP8.64□□□□□ -1.03
LRRC28-204ENST00000558172 ZNF581Q9P0T4 197 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 UBE2J1Q9Y385 318 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-204ENST00000558172 KPTNQ9Y664 436 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 AUP1Q9Y679 476 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 LINC00312Q9Y6C7 94 aa8.64□□□□□ -1.03
LRRC28-204ENST00000558172 TEP1Q99973 2627 aaKnown RBP8.63□□□□□ -1.03
LRRC28-204ENST00000558172 MEIKINA0A087WXM9 373 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 TMEM30CPA0ZSE6 113 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 ODAMA1E959 279 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 UBE2QL1A1L167 161 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 DPPA5A6NC42 116 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 POM121CA8CG34 1229 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 RAB27BO00194 218 aa8.63□□□□□ -1.03
LRRC28-204ENST00000558172 MT-ND4P03905 459 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms