RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 C16orf78Q8WTQ4 265 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 KCTD4Q8WVF5 259 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 MAFIPQ8WZ33 124 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 PHYHIPLQ96FC7 376 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM56Q96MV1 263 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 OR2V2Q96R30 315 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 HSD17B10Q99714 261 aaKnown RBP2.14□□□□□ -2.07
TRAV28-201ENST00000557548 AIF1LQ9BQI0 150 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 SULT4A1Q9BR01 284 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF2Q9BSG1 426 aaPredicted RBP2.14□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM243Q9BU79 118 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 UGT2B28Q9BY64 529 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 COA1Q9GZY4 146 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 PRORYQ9H606 182 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 NOX3Q9HBY0 568 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 FAM206AQ9NX38 181 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 COMMD9Q9P000 198 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 HES2Q9Y543 173 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 TEX14Q8IWB6 1497 aa2.14□□□□□ -2.07
TRAV28-201ENST00000557548 CROCC2H7BZ55 1655 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 IGKV1-27A0A075B6S5 117 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TRAV19A0A0A6YYK7 116 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 DAPL1A0PJW8 107 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 NDUFC2-KCTD14E9PQ53 114 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TSTD3H0UI37 97 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 J3QT63 122 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TNFRSF11BO00300 401 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 UBDO15205 165 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 KLRC4O43908 158 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 NOS1APO75052 506 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 SMIM24O75264 130 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 SLC22A5O76082 557 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 SLC25A14O95258 325 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 CD8AP01732 235 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TRBV12-3P01733 135 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 PCCAP05165 728 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 CD5P06127 495 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 KCNE1P15382 129 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 MYL12AP19105 171 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 ALOX5APP20292 161 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 CXCR1P25024 350 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 IFNGR2P38484 337 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 RPS10P46783 165 aaKnown RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 GABRA4P48169 554 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 ACOT2P49753 483 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM33P57088 247 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 RAB38P57729 211 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 MTPNP58546 118 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 RAP1AP62834 184 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 BTN3A2P78410 334 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 INCA1Q0VD86 236 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 EIF4EBP2Q13542 120 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF235Q14590 738 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 IRF4Q15306 451 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TOMM34Q15785 309 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 HLA-DRB5Q30154 266 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 SLC25A35Q3KQZ1 300 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 AVPI1Q5T686 147 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM236Q5W0B7 351 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM42Q69YG0 159 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM205Q6UW68 189 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 FAM19A5Q7Z5A7 132 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 PHF13Q86YI8 300 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF584Q8IVC4 421 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 CPNE9Q8IYJ1 553 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 LYG1Q8N1E2 194 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 LINC01555Q8NAE3 123 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 OR4K17Q8NGC6 315 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 OR52N1Q8NH53 320 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 NT5CQ8TCD5 201 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 ZFAND1Q8TCF1 268 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 PTX4Q96A99 478 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TMEM159Q96B96 161 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TCEAL4Q96EI5 215 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 IMP4Q96G21 291 aaKnown RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 BTF3L4Q96K17 158 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 KCNS1Q96KK3 526 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TSC22D3Q99576 134 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 DOK1Q99704 481 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TIPINQ9BVW5 301 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 SAMD10Q9BYL1 202 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 MAP1LC3AQ9H492 121 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 ZNF430Q9H8G1 570 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TAS2R13Q9NYV9 303 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 FBXO5Q9UKT4 447 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 HHLA2Q9UM44 414 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 SLC7A11Q9UPY5 501 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 SIGLEC7Q9Y286 467 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 NDUFAF1Q9Y375 327 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 KIF25-AS1Q9Y6Z4 181 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 PLXNC1O60486 1568 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 REREQ9P2R6 1566 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 UBR1Q8IWV7 1749 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 MROH1Q8NDA8 1641 aa2.13□□□□□ -2.07
TRAV28-201ENST00000557548 RGPD8O14715 1765 aaPredicted RBP2.13□□□□□ -2.07
TRAV28-201ENST00000557548 TAF1LQ8IZX4 1826 aa2.12□□□□□ -2.07
TRAV28-201ENST00000557548 ABCC1P33527 1531 aa2.12□□□□□ -2.07
TRAV28-201ENST00000557548 ZFYVE16Q7Z3T8 1539 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms