RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 FAM157CP0CG43 387 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 ERP29P30040 261 aaKnown RBP17.16■□□□□ 0.34
SEC23A-213ENST00000557280 EFNB2P52799 333 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 NCS1P62166 190 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 KLRD1Q13241 179 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 KRBOX4Q5JUW0 171 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 RSBN1Q5VWQ0 802 aaPredicted RBP17.16■□□□□ 0.34
SEC23A-213ENST00000557280 OR2W3Q7Z3T1 314 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 PDZD9Q8IXQ8 264 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 NANPQ8TBE9 248 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 DYRK2Q92630 601 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 TM2D1Q9BX74 207 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 LPAR5Q9H1C0 372 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 LIN7BQ9HAP6 207 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 DSCAML1Q8TD84 2053 aa17.16■□□□□ 0.34
SEC23A-213ENST00000557280 ODAMA1E959 279 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 M0R1W7 72 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 RUSC1-AS1Q66K80 236 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 RAB12Q6IQ22 244 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 SFXN4Q6P4A7 337 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 C22orf15Q8WYQ4 148 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 TNFRSF14Q92956 283 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 LHX4Q969G2 390 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 DMRTB1Q96MA1 342 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 DAPK2Q9UIK4 370 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 KIF25Q9UIL4 384 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 LINC00312Q9Y6C7 94 aa17.15■□□□□ 0.34
SEC23A-213ENST00000557280 TRAV39A0A0B4J263 110 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 CENPVL3A0A0U1RRI6 287 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 hADV38S2A0JD32 116 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A10PA6NDY2 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A18PA6NE21 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A16PA6NEW6 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A20PA6NIJ5 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A8PA6NJQ4 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A7PA6NKC0 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A22PA8MWA6 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A12PA8MX19 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A5PA8MXJ8 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A23PA8MXZ1 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A15PP0C7V4 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A13PP0C7W8 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A14PP0C7W9 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 FAM90A24PP0C7X0 464 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 EPHA1P21709 976 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 VBP1P61758 197 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 MEF2CQ06413 473 aaPredicted RBP17.14■□□□□ 0.33
SEC23A-213ENST00000557280 NKAPLQ5M9Q1 402 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 BRD3OSQ6XYD6 125 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 CMTM4Q8IZR5 234 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 BCL6BQ8N143 479 aaPredicted RBP17.14■□□□□ 0.33
SEC23A-213ENST00000557280 ZNF69Q9UC07 566 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 PEX16Q9Y5Y5 336 aa17.14■□□□□ 0.33
SEC23A-213ENST00000557280 SETD2Q9BYW2 2564 aaPredicted RBP17.14■□□□□ 0.33
SEC23A-213ENST00000557280 NIPBLQ6KC79 2804 aaeCLIP17.14■□□□□ 0.33
SEC23A-213ENST00000557280 RNASEK-C17orf49H0YIS7 233 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 PDCD6O75340 191 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 MMP23AO75900 390 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 ZNF728P0DKX0 622 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 CHATP28329 748 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 GPR107Q5VW38 600 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 HCP5Q6MZN7 132 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 ZNF782Q6ZMW2 699 aaPredicted RBP17.13■□□□□ 0.33
SEC23A-213ENST00000557280 GPR141Q7Z602 305 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 OR13A1Q8NGR1 328 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 NEK7Q8TDX7 302 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 POM121Q96HA1 1249 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 ZNF714Q96N38 554 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 METTL8Q9H825 291 aaKnown RBP17.13■□□□□ 0.33
SEC23A-213ENST00000557280 FBLN5Q9UBX5 448 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 NUP50Q9UKX7 468 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 NAV3Q8IVL0 2385 aa17.13■□□□□ 0.33
SEC23A-213ENST00000557280 MEIKINA0A087WXM9 373 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 UBE2QL1A1L167 161 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 FOXI3A8MTJ6 420 aaPredicted RBP17.12■□□□□ 0.33
SEC23A-213ENST00000557280 C17orf98A8MV24 154 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 SOCS1O15524 211 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 GABARAPO95166 117 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 SNRPBP14678 240 aaKnown RBP17.12■□□□□ 0.33
SEC23A-213ENST00000557280 FUT3P21217 361 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 PRTN3P24158 256 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 PAX5Q02548 391 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 CTF1Q16619 201 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 C1orf122Q6ZSJ8 110 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 C6orf201Q7Z4U5 140 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 TRAPPC6BQ86SZ2 158 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 PRIMA1Q86XR5 153 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 ANKRD13BQ86YJ7 626 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 PNKDQ8N490 385 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 SULT4A1Q9BR01 284 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 SPACA1Q9HBV2 294 aa17.12■□□□□ 0.33
SEC23A-213ENST00000557280 TRGV10A0A0A0MS01 117 aa17.11■□□□□ 0.33
SEC23A-213ENST00000557280 A0A1W2PRD5 423 aa17.11■□□□□ 0.33
SEC23A-213ENST00000557280 A0A1W2PRF3 423 aa17.11■□□□□ 0.33
SEC23A-213ENST00000557280 A0A1W2PRM7 423 aa17.11■□□□□ 0.33
SEC23A-213ENST00000557280 PAHP00439 452 aa17.11■□□□□ 0.33
SEC23A-213ENST00000557280 RPS19P39019 145 aaKnown RBP17.11■□□□□ 0.33
SEC23A-213ENST00000557280 GDNFP39905 211 aa17.11■□□□□ 0.33
SEC23A-213ENST00000557280 GLP1RP43220 463 aa17.11■□□□□ 0.33
SEC23A-213ENST00000557280 KCNJ3P48549 501 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms