RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 TBC1D26Q86UD7 250 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 TPRX1Q8N7U7 411 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 TINAGQ9UJW2 476 aa13.21□□□□□ -0.29
TMEM55B-207ENST00000557041 CELA3BP08861 270 aa13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 HOXD4P09016 255 aaPredicted RBP13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF708P17019 499 aa13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 LHX2P50458 406 aa13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 TMEM178AQ8NBL3 297 aa13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 ZC3H10Q96K80 434 aaKnown RBP13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 IER2Q9BTL4 223 aa13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 PUS1Q9Y606 427 aaKnown RBP eCLIP13.21□□□□□ -0.3
TMEM55B-207ENST00000557041 C3orf85A0A1B0GTC6 90 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 MBPP02686 304 aaPredicted RBP13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 NFYBP25208 207 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF345Q14585 488 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 TFF1P04155 84 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 FGF2P09038 288 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 CTSSP25774 331 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 ARR3P36575 388 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 GABRA2P47869 451 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 TBC1D28Q2M2D7 210 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 GLRX5Q86SX6 157 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 TP53RKQ96S44 253 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 GPR87Q9BY21 358 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 TLNRD1Q9H1K6 362 aa13.2□□□□□ -0.3
TMEM55B-207ENST00000557041 TMEM218A2RU14 115 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF503-AS2A6NEH8 195 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 OR6C65A6NJZ3 312 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 CDRT15L2A8MXV6 281 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 DNPH1O43598 174 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 DAOP14920 347 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF826PQ6ZT77 177 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 BSCL2Q96G97 398 aaPredicted RBP13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 FAM212BQ9NTI7 297 aaPredicted RBP13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 RFNGQ9Y644 331 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 USF3Q68DE3 2245 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 CFAP47Q6ZTR5 3102 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 TIMM8AO60220 97 aaPredicted RBP13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 CD59P13987 128 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 CFPP27918 469 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 OTX1P32242 354 aaPredicted RBP13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 MIDNQ504T8 468 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 SHEQ5VZ18 495 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 FAM58AQ8N1B3 248 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 ASB13Q8WXK3 278 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 MSL2Q9HCI7 577 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 GPR37O15354 613 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 JTBO76095 146 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 IL2RGP31785 369 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 GFRA1P56159 465 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 CLDN18P56856 261 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 GNG3P63215 75 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 RNF138Q8WVD3 245 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 MYOZ1Q9NP98 299 aaPredicted RBP13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 MTCH1Q9NZJ7 389 aa13.19□□□□□ -0.3
TMEM55B-207ENST00000557041 DEFB108AA8MXU0 73 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 E5RGE8 158 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 MPPED1O15442 326 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 LPAR6P43657 344 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 PUSL1Q8N0Z8 303 aaKnown RBP13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 OR2G3Q8NGZ4 309 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 NINJ1Q92982 152 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 PRO3102Q9H379 93 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 FBLN5Q9UBX5 448 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 NSG2Q9Y328 171 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 INTS1Q8N201 2190 aaKnown RBP13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 TLN1Q9Y490 2541 aaKnown RBP13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 S100A6P06703 90 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 LIAT1Q6ZQX7 453 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 POC1AQ8NBT0 407 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 GLYATL2Q8WU03 294 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 C10orf35Q96D05 121 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 TM2D1Q9BX74 207 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 A0A1W2PNU3 283 aaPredicted RBP13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 CRYM-AS1A6NIL9 109 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 A8MXK9 166 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 CYC1P08574 325 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 HKR1P10072 659 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 OR8G1Q15617 311 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 HAGHQ16775 308 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 SH3BGRL3Q9H299 93 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 LPAR3Q9UBY5 353 aa13.18□□□□□ -0.3
TMEM55B-207ENST00000557041 IGHV3-43A0A0B4J1X8 118 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 ATG12O94817 140 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 GLAP06280 429 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 IGHV3-43DP0DP04 118 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 SUMF2Q8NBJ7 301 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 C21orf140B9A014 251 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 CDX4O14627 284 aaPredicted RBP13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 ECI1P42126 302 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 ABLIM2Q6H8Q1 611 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 SPACA1Q9HBV2 294 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 TREM2Q9NZC2 230 aa13.17□□□□□ -0.3
TMEM55B-207ENST00000557041 KIR2DS1A0A191URI9 304 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 RNASEK-C17orf49H0YIS7 233 aa13.16□□□□□ -0.3
TMEM55B-207ENST00000557041 TERTO14746 1132 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms