RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 FAM90A8PA6NJQ4 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A7PA6NKC0 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A22PA8MWA6 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A12PA8MX19 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A5PA8MXJ8 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A23PA8MXZ1 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 H3BUI4 141 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 HOXA3O43365 443 aaPredicted RBP8.72□□□□□ -1.01
LINC00239-201ENST00000556973 OR7C1O76099 320 aaPredicted RBP8.72□□□□□ -1.01
LINC00239-201ENST00000556973 RNASE1P07998 156 aaKnown RBP8.72□□□□□ -1.01
LINC00239-201ENST00000556973 MELTFP08582 738 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FBP1P09467 338 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A15PP0C7V4 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A13PP0C7W8 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A14PP0C7W9 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FAM90A24PP0C7X0 464 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 UBBP0CG47 229 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 GALP22466 123 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 SAA4P35542 130 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 PSMD7P51665 324 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 LGALS4P56470 323 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 PAX5Q02548 391 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 ATXN7L3Q14CW9 347 aaPredicted RBP8.72□□□□□ -1.01
LINC00239-201ENST00000556973 SSX1Q16384 188 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 C1orf100Q5SVJ3 147 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 ZNF773Q6PK81 442 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 TCF23Q7RTU1 214 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 LDLRAD3Q86YD5 345 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 PNKDQ8N490 385 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.72□□□□□ -1.01
LINC00239-201ENST00000556973 SUMF2Q8NBJ7 301 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 COQ2Q96H96 371 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 DUX5Q96PT3 197 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 DPCDQ9BVM2 203 aaPredicted RBP8.72□□□□□ -1.01
LINC00239-201ENST00000556973 CST11Q9H112 138 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 DPAGT1Q9H3H5 408 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 SPACA1Q9HBV2 294 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 NDUFB11Q9NX14 153 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 OR6C3Q9NZP0 311 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 POMT1Q9Y6A1 747 aa8.72□□□□□ -1.01
LINC00239-201ENST00000556973 FBN1P35555 2871 aaKnown RBP8.72□□□□□ -1.01
LINC00239-201ENST00000556973 ODAMA1E959 279 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 MEX3AA1L020 520 aaKnown RBP8.71□□□□□ -1.02
LINC00239-201ENST00000556973 CCRL2O00421 344 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 HSPB6O14558 160 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 CRTAPO75718 401 aaPredicted RBP8.71□□□□□ -1.02
LINC00239-201ENST00000556973 PAHP00439 452 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 MGMTP16455 207 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 CALRP27797 417 aaKnown RBP8.71□□□□□ -1.02
LINC00239-201ENST00000556973 HTR2CP28335 458 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 RANBP1P43487 201 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 IER3P46695 156 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 RBM39Q14498 530 aaKnown RBP8.71□□□□□ -1.02
LINC00239-201ENST00000556973 TAF9Q16594 264 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 KCTD21Q4G0X4 260 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 ATAD3CQ5T2N8 411 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 OR52W1Q6IF63 320 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 C16orf87Q6PH81 154 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 CD200R1LQ6Q8B3 271 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 ZNF782Q6ZMW2 699 aaPredicted RBP8.71□□□□□ -1.02
LINC00239-201ENST00000556973 OR11H6Q8NGC7 330 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 SSMEM1Q8WWF3 244 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 SELENOIQ9C0D9 397 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 MEGF9Q9H1U4 602 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 TMEM133Q9H2Q1 129 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 BANF2Q9H503 90 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 ING3Q9NXR8 418 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 SESN1Q9Y6P5 492 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 JMJD1CQ15652 2540 aa8.71□□□□□ -1.02
LINC00239-201ENST00000556973 MEIKINA0A087WXM9 373 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 TRDV1A0A1B0GX56 115 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 TMEM89A2RUT3 159 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 ZNF729A6NN14 1252 aaPredicted RBP8.7□□□□□ -1.02
LINC00239-201ENST00000556973 MCRIP1C9JLW8 97 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 SLC22A1O15245 554 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 CLPXO76031 633 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 GLAP06280 429 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 GZMHP20718 246 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 COX7A1P24310 79 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 PSMB9P28065 219 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 ACTG1P63261 375 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 RSBN1Q5VWQ0 802 aaPredicted RBP8.7□□□□□ -1.02
LINC00239-201ENST00000556973 SLC35E4Q6ICL7 350 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 HEPN1Q6WQI6 88 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 RTN4RL2Q86UN3 420 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 BEND2Q8NDZ0 799 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 TMEM104Q8NE00 496 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 OR6M1Q8NGM8 313 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 KCNG3Q8TAE7 436 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 GCDHQ92947 438 aaPredicted RBP8.7□□□□□ -1.02
LINC00239-201ENST00000556973 ZNF581Q9P0T4 197 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 KIF25Q9UIL4 384 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 AK6Q9Y3D8 172 aaKnown RBP8.7□□□□□ -1.02
LINC00239-201ENST00000556973 TBL2Q9Y4P3 447 aaKnown RBP8.7□□□□□ -1.02
LINC00239-201ENST00000556973 V9GY05 133 aa8.7□□□□□ -1.02
LINC00239-201ENST00000556973 TRAV1-2A0A0B4J238 106 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 KBTBD11-OT1A0A1B0GTJ5 212 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 SLC17A2O00624 439 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 PDCD5O14737 125 aa8.69□□□□□ -1.02
LINC00239-201ENST00000556973 BPNT1O95861 308 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms