RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 TRAV38-1A0A0B4J264 116 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 IGHV3-64DA0A0J9YX35 117 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 MDFIC2A0A1B0GVS7 189 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 A0A1W2PRV1 198 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 EFCAB9A8MZ26 197 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF879B4DU55 563 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 F5H5P2 479 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 CCSO14618 274 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 CYB5R3P00387 301 aaPredicted RBP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 PAHP00439 452 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 NPPAP01160 153 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 THY1P04216 161 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 CRABP1P29762 137 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 TGFBR2P37173 567 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 LSM6P62312 80 aaKnown RBP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ECH1Q13011 328 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 P2RY14Q15391 338 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF181Q2M3W8 571 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF404Q494X3 552 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 TNFAIP8L3Q5GJ75 292 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 NHLRC3Q5JS37 347 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 WDR25Q64LD2 544 aaPredicted RBP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 OR2T2Q6IF00 324 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ERICH5Q6P6B1 374 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 DNM1P34Q6PK57 102 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 DLEU7Q6UYE1 221 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 FBXW12Q6X9E4 464 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 Q6ZR03 302 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 CYP4Z1Q86W10 505 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 FUNDC1Q8IVP5 155 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 NKAIN4Q8IVV8 208 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 FGFRL1Q8N441 504 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 LINC00612Q8N6U2 182 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 SPERTQ8NA61 448 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 BHLHE23Q8NDY6 225 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 GPR32P1Q8NGA4 272 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 OR10AD1Q8NGE0 317 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 OR10A6Q8NH74 314 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 OR1F12Q8NHA8 337 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 LINC01006Q8NI28 216 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF420Q8TAQ5 688 aaPredicted RBP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 TAMM41Q96BW9 452 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 TPD52L3Q96J77 140 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 S1PR3Q99500 378 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 PRSS27Q9BQR3 290 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 WFDC6Q9BQY6 131 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 RSPO3Q9BXY4 272 aaPredicted RBP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 CHIAQ9BZP6 476 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 IKZF5Q9H5V7 419 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 KAT8Q9H7Z6 458 aaKnown RBP3.82□□□□□ -1.8
HIF1A-209ENST00000556827 PRR34Q9NV39 138 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ZNF446Q9NWS9 450 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 DCAF16Q9NXF7 216 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 PTTG3PQ9NZH4 202 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 ATPIF1Q9UII2 106 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 PRR14LQ5THK1 2151 aa3.82□□□□□ -1.8
HIF1A-209ENST00000556827 MALRD1Q5VYJ5 2156 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 TRAV27A0A087WT01 109 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 IGKV1D-43A0A0B4J1Z2 117 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 IGHV1-69DA0A0B4J2H0 117 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 A0A1B0GVI7 797 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 PRSS37A4D1T9 235 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 C5orf63A6NC05 138 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 LGALS8O00214 317 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 PIN1P1O15428 100 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 GMDSO60547 372 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 SLC16A7O60669 478 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 SHOX2O60902 331 aaPredicted RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 LYPD3O95274 346 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 IGHV1-69P01742 117 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 IFNW1P05000 195 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 CD14P08571 375 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 FBP1P09467 338 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 GGT2P36268 569 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 CFHR2P36980 270 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 OR1E2P47887 323 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 ARF6P62330 175 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 PAX2Q02962 417 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 ENDOGQ14249 297 aaKnown RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 MEF2DQ14814 521 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 TRAM2Q15035 370 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 MAPRE2Q15555 327 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 OR8G1Q15617 311 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 PCK2Q16822 640 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 SLC36A3Q495N2 470 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 ZBED5Q49AG3 693 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 SPRNQ5BIV9 151 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 BEND6Q5SZJ8 279 aaPredicted RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 ASPHD2Q6ICH7 369 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 Q6ZRG5 221 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 TMUB2Q71RG4 321 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 PGAP1Q75T13 922 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 CCDC80Q76M96 950 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 MRPL21Q7Z2W9 205 aaKnown RBP3.81□□□□□ -1.8
HIF1A-209ENST00000556827 ADCK1Q86TW2 530 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 SERPINA12Q8IW75 414 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 STHQ8IWL8 128 aa3.81□□□□□ -1.8
HIF1A-209ENST00000556827 MICU2Q8IYU8 434 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms