RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CFHR1Q03591 330 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 PPP1R1AQ13522 171 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 AMELYQ99218 206 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 ZDHHC8Q9ULC8 765 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 DNASE2O00115 360 aaPredicted RBP15.06■□□□□ 0
PTPN21-208ENST00000556564 SFT2D2O95562 160 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 MMP16P51512 607 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 SOHLH1Q5JUK2 328 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 ZFP82Q8N141 532 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 R3HDM4Q96D70 268 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 BSCL2Q96G97 398 aaPredicted RBP15.06■□□□□ 0
PTPN21-208ENST00000556564 IMMP1LQ96LU5 166 aa15.06■□□□□ 0
PTPN21-208ENST00000556564 SLC25A30Q5SVS4 291 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 CADM3Q8N126 398 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 HDHD3Q9BSH5 251 aaPredicted RBP15.05■□□□□ 0
PTPN21-208ENST00000556564 ST6GALNAC2Q9UJ37 374 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 TRBV23-1A0A0A0MS06 115 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 SCAND1P57086 179 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 TOR2AQ5JU69 321 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 RNF122Q9H9V4 155 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 C19orf12Q9NSK7 152 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 POMT1Q9Y6A1 747 aa15.05■□□□□ 0
PTPN21-208ENST00000556564 HLA-DRB3P79483 266 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 MPV17LQ2QL34 196 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 ANXA10Q9UJ72 324 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 VWA8A3KMH1 1905 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 TXNDC12O95881 172 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 DRAXINQ8NBI3 349 aaPredicted RBP15.05■□□□□ -0
PTPN21-208ENST00000556564 A0A1W2PN81 502 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 CHRNA7P36544 502 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 KDF1Q8NAX2 398 aaPredicted RBP15.05■□□□□ -0
PTPN21-208ENST00000556564 FLVCR1-AS1Q8TAF5 88 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 WDR89Q96FK6 387 aaPredicted RBP15.05■□□□□ -0
PTPN21-208ENST00000556564 ZNF714Q96N38 554 aa15.05■□□□□ -0
PTPN21-208ENST00000556564 ZNF320A2RRD8 509 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 TMEM147Q9BVK8 224 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 RPL36A-HNRNPH2H7BZ11 118 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 NDUFB6O95139 128 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 CLDN14O95500 239 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 PDGFAP04085 211 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 OR2B8PP59922 312 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 USF2Q15853 346 aaPredicted RBP15.04■□□□□ -0
PTPN21-208ENST00000556564 ECSCRQ19T08 205 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 ZNF787Q6DD87 383 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 ETFRF1Q6IPR1 90 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 KLF14Q8TD94 323 aaPredicted RBP15.04■□□□□ -0
PTPN21-208ENST00000556564 ADTRPQ96IZ2 230 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 DOK5Q9P104 306 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 LHFPL6Q9Y693 200 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 IGLV1-36A0A0B4J1U3 117 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 GLDNQ6ZMI3 551 aaPredicted RBP15.04■□□□□ -0
PTPN21-208ENST00000556564 LINC00596Q86U02 117 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 PERPQ96FX8 193 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 GPR137Q96N19 417 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 LPAR3Q9UBY5 353 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 SLC16A12Q6ZSM3 486 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 SCARB1Q8WTV0 552 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 LHX4Q969G2 390 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 NIPSNAP3BQ9BS92 247 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 CKAP5Q14008 2032 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 A0A0U1RQV5 110 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 C9orf170A2RU37 121 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 RAMP1O60894 148 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 ST3GAL2Q16842 350 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 HSD17B10Q99714 261 aaKnown RBP15.04■□□□□ -0
PTPN21-208ENST00000556564 TMUB1Q9BVT8 246 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 SAMD10Q9BYL1 202 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 OR1A1Q9P1Q5 309 aa15.04■□□□□ -0
PTPN21-208ENST00000556564 SERTM2A0A1B0GWG4 89 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 C19orf67A6NJJ6 358 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 MBP02144 154 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 TAGLN2P37802 199 aaKnown RBP15.03■□□□□ -0
PTPN21-208ENST00000556564 ZNF658BQ4V348 819 aaPredicted RBP15.03■□□□□ -0
PTPN21-208ENST00000556564 GAPTQ8N292 157 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 OR8G5Q8NG78 346 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 TMEM54Q969K7 222 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 LANCL1O43813 399 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 LMX1BO60663 402 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 VSIG8P0DPA2 414 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 CCL28Q9NRJ3 127 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 PPP1CCP36873 323 aaKnown RBP15.03■□□□□ -0
PTPN21-208ENST00000556564 RPS10P46783 165 aaKnown RBP15.03■□□□□ -0
PTPN21-208ENST00000556564 RBM11P57052 281 aaKnown RBP15.03■□□□□ -0
PTPN21-208ENST00000556564 TBR1Q16650 682 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 SVBPQ8N300 66 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 MUC15Q8N387 334 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 SAV1Q9H4B6 383 aaPredicted RBP15.03■□□□□ -0
PTPN21-208ENST00000556564 TMED3Q9Y3Q3 217 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 SLC25A4P12235 298 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 ZNF788Q6ZQV5 615 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 ZNF485Q8NCK3 441 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 MESP1Q9BRJ9 268 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 THYN1Q9P016 225 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 LALBAP00709 142 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 ERVFRD-1P60508 538 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 C1RLQ9NZP8 487 aa15.03■□□□□ -0
PTPN21-208ENST00000556564 ZIC3O60481 467 aa15.02■□□□□ -0
PTPN21-208ENST00000556564 EGR4Q05215 589 aa15.02■□□□□ -0
PTPN21-208ENST00000556564 NEIL1Q96FI4 390 aaPredicted RBP15.02■□□□□ -0
PTPN21-208ENST00000556564 DOCK6Q96HP0 2047 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms