RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ING3Q9NXR8 418 aa14.41□□□□□ -0.1
TUBB3-211ENST00000556536 A8MXK9 166 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 MCRIP1C9JLW8 97 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 MGST3O14880 152 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 AESQ08117 197 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 FAM189A2Q15884 450 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 Q6ZTK2 550 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 GDPD3Q7L5L3 318 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 OR4M1Q8NGD0 313 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 OR5D13Q8NGL4 314 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 PPP1R35Q8TAP8 253 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 NEK7Q8TDX7 302 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 H1FXQ92522 213 aaKnown RBP14.4□□□□□ -0.1
TUBB3-211ENST00000556536 RAB3CQ96E17 227 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 C6orf62Q9GZU0 229 aaPredicted RBP14.4□□□□□ -0.1
TUBB3-211ENST00000556536 PLEKHJ1Q9NW61 149 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 KCNK7Q9Y2U2 307 aa14.4□□□□□ -0.1
TUBB3-211ENST00000556536 LOC105371242A0A075B767 164 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 MEX3AA1L020 520 aaKnown RBP14.39□□□□□ -0.11
TUBB3-211ENST00000556536 H3BUI4 141 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 FOXH1O75593 365 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 APOA1P02647 267 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 CSN2P05814 226 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 GLAP06280 429 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 GNB3P16520 340 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 CDK2P24941 298 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 GLIPR1P48060 266 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 EDDM3BP56851 147 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 OLFML2AQ68BL7 652 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 LAX1Q8IWV1 398 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 IZUMO1Q8IYV9 350 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 RAB40AQ8WXH6 277 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 MSI2Q96DH6 328 aaKnown RBP14.39□□□□□ -0.11
TUBB3-211ENST00000556536 CMTM3Q96MX0 182 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 DCTN5Q9BTE1 182 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 ZMAT3Q9HA38 289 aaKnown RBP14.39□□□□□ -0.11
TUBB3-211ENST00000556536 C19orf12Q9NSK7 152 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 HSF4Q9ULV5 492 aa14.39□□□□□ -0.11
TUBB3-211ENST00000556536 GPR37O15354 613 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 RGS5O15539 181 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 HIST1H1DP16402 221 aaKnown RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 P2RX3P56373 397 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 PAX2Q02962 417 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 RBM39Q14498 530 aaKnown RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 CDNFQ49AH0 187 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 KRBOX4Q5JUW0 171 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 RSBN1Q5VWQ0 802 aaPredicted RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 LINC01356Q8N9X3 169 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 S100A16Q96FQ6 103 aaKnown RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 MMP26Q9NRE1 261 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 ETAA1Q9NY74 926 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 AK3Q9UIJ7 227 aa14.38□□□□□ -0.11
TUBB3-211ENST00000556536 RPUSD1Q9UJJ7 312 aaKnown RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 ELF5Q9UKW6 265 aaPredicted RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 POLR3KQ9Y2Y1 108 aaPredicted RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
TUBB3-211ENST00000556536 TRAV18A0A075B6X5 111 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 FAM25AB3EWG3 89 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 FAM25CB3EWG5 89 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 FAM25GB3EWG6 89 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 B4DSR2 109 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 MFNGO00587 321 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 SCGNO76038 276 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 ECDO95905 644 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-211ENST00000556536 MSMBP08118 114 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 ERP29P30040 261 aaKnown RBP14.37□□□□□ -0.11
TUBB3-211ENST00000556536 KCNJ3P48549 501 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 GZMKP49863 264 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 RPL31P62899 125 aaKnown RBP14.37□□□□□ -0.11
TUBB3-211ENST00000556536 MADCAM1Q13477 382 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 CD276Q5ZPR3 534 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 ZNF497Q6ZNH5 498 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 LY6G5BQ8NDX9 201 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 DACT3Q96B18 629 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-211ENST00000556536 NUDT16L1Q9BRJ7 211 aaKnown RBP14.37□□□□□ -0.11
TUBB3-211ENST00000556536 HDHD3Q9BSH5 251 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-211ENST00000556536 MMP27Q9H306 513 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 DIABLOQ9NR28 239 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 KIF25Q9UIL4 384 aa14.37□□□□□ -0.11
TUBB3-211ENST00000556536 TRBV23-1A0A0A0MS06 115 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 A0A0A6YYH2 397 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 TRAV39A0A0B4J263 110 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 ODAMA1E959 279 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 A6NJ64 397 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 XRCC3O43542 346 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 MT-ND4P03905 459 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 ZNF16P17020 682 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-211ENST00000556536 PAX5Q02548 391 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 KRTAP1-1Q07627 177 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 ZNF260Q3ZCT1 412 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 TMEM200BQ69YZ2 307 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 SLC35E4Q6ICL7 350 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 TCF23Q7RTU1 214 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 FAM185AQ8N0U4 392 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 C8orf46Q8TAG6 207 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 PHF21AQ96BD5 680 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 C18orf12Q96KH6 178 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 A3GALT2U3KPV4 340 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 ZANQ9Y493 2812 aa14.36□□□□□ -0.11
TUBB3-211ENST00000556536 MEIKINA0A087WXM9 373 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms