RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RBM14Q96PK6 669 aaKnown RBP18.05■□□□□ 0.48
ACTN1-220ENST00000556433 RPL36Q9Y3U8 105 aaKnown RBP18.05■□□□□ 0.48
ACTN1-220ENST00000556433 KBTBD11-OT1A0A1B0GTJ5 212 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 LOC100130705A0A1B0GUX0 176 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 LY6LH3BQJ8 138 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 MAGEB3O15480 346 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 RAB3AP20336 220 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 MNDAP41218 407 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 ZSCAN26Q16670 478 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 PAN3Q58A45 887 aaKnown RBP18.04■□□□□ 0.48
ACTN1-220ENST00000556433 ELP2Q6IA86 826 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 Q6ZPA2 131 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 CCDC121Q6ZUS5 278 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 PXT1Q8NFP0 134 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 OR51T1Q8NGJ9 327 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 GPER1Q99527 375 aa18.04■□□□□ 0.48
ACTN1-220ENST00000556433 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.04■□□□□ 0.48
ACTN1-220ENST00000556433 MEIKINA0A087WXM9 373 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 TCRBV4S1A1TA0A5B7 111 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 SH2D7A6NKC9 451 aaPredicted RBP18.03■□□□□ 0.48
ACTN1-220ENST00000556433 CGB3P0DN86 165 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 CGB7P0DN87 165 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 SOX2P48431 317 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 GTF2A1P52655 376 aaPredicted RBP18.03■□□□□ 0.48
ACTN1-220ENST00000556433 KLHL22Q53GT1 634 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 CCDC144NLQ6NUI1 221 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 OR9G1Q8NH87 305 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 CNIH3Q8TBE1 160 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 TNFAIP8L1Q8WVP5 186 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 CPNE2Q96FN4 548 aaPredicted RBP18.03■□□□□ 0.48
ACTN1-220ENST00000556433 KIRREL1Q96J84 757 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 BARHL1Q9BZE3 327 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 MRPS18AQ9NVS2 196 aaKnown RBP18.03■□□□□ 0.48
ACTN1-220ENST00000556433 FAM118AQ9NWS6 357 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 KIF25Q9UIL4 384 aa18.03■□□□□ 0.48
ACTN1-220ENST00000556433 TRAV24A0A0B4J272 114 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 OOSP1A8MZH6 123 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 C21orf33P30042 268 aaPredicted RBP18.02■□□□□ 0.48
ACTN1-220ENST00000556433 GLP1RP43220 463 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 TCTEX1D4Q5JR98 221 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 WFDC9Q8NEX5 89 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 OR51A2Q8NGJ7 313 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 OR13A1Q8NGR1 328 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 HAVCR2Q8TDQ0 301 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 NCOR1P1Q9H4R4 102 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 NECAP2Q9NVZ3 263 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 CALYQ9NYX4 217 aa18.02■□□□□ 0.48
ACTN1-220ENST00000556433 GABRPO00591 440 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 AMY1AP04745 511 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 AMY2AP04746 511 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 FAM106CPP0CH98 169 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 PF4V1P10720 104 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 CD33P20138 364 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 RSU1Q15404 277 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 C9orf152Q5JTZ5 239 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 ZNF529Q6P280 563 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 OR10K1Q8NGX5 313 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 MRAPQ8TCY5 172 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 RPEQ96AT9 228 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 PHF21AQ96BD5 680 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 JAM3Q9BX67 310 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 FAM192AQ9GZU8 254 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 S100A14Q9HCY8 104 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 TAS2R4Q9NYW5 299 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 IDI2-AS1Q9NZ38 188 aa18.01■□□□□ 0.47
ACTN1-220ENST00000556433 TSSC4Q9Y5U2 329 aaPredicted RBP18.01■□□□□ 0.47
ACTN1-220ENST00000556433 PIN1P1O15428 100 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 HTR3BO95264 441 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 IGHV3-7P01780 117 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 LIMS3P0CW19 117 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 LIMS4P0CW20 117 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 IL13RA2Q14627 380 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 GPR148Q8TDV2 347 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 APH1BQ8WW43 257 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 RGP1Q92546 391 aaPredicted RBP18■□□□□ 0.47
ACTN1-220ENST00000556433 LEAP2Q969E1 77 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 MYDGFQ969H8 173 aa18■□□□□ 0.47
ACTN1-220ENST00000556433 AMMECR1Q9Y4X0 333 aaPredicted RBP18■□□□□ 0.47
ACTN1-220ENST00000556433 J3QR06 171 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 M0QZK8 103 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 IGLL1P15814 213 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 LOXL3P58215 753 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 LTC4SQ16873 150 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 PIGYQ3MUY2 71 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 RSBN1Q5VWQ0 802 aaPredicted RBP17.99■□□□□ 0.47
ACTN1-220ENST00000556433 RPL22L1Q6P5R6 122 aaKnown RBP17.99■□□□□ 0.47
ACTN1-220ENST00000556433 ASCL4Q6XD76 172 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 PQLC1Q8N2U9 271 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 Q8NFD4 153 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 OR4X2Q8NGF9 303 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 RFESDQ8TAC1 157 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 PLPPR1Q8TBJ4 325 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 TOMM40LQ969M1 308 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 FGF20Q9NP95 211 aaPredicted RBP17.99■□□□□ 0.47
ACTN1-220ENST00000556433 PCDHB16Q9NRJ7 776 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 ING4Q9UNL4 249 aa17.99■□□□□ 0.47
ACTN1-220ENST00000556433 IL1AP01583 271 aa17.98■□□□□ 0.47
ACTN1-220ENST00000556433 CD2P06729 351 aa17.98■□□□□ 0.47
ACTN1-220ENST00000556433 SMN1Q16637 294 aaKnown RBP17.98■□□□□ 0.47
ACTN1-220ENST00000556433 FOXB2Q5VYV0 432 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms