RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TCF7L1Q9HCS4 588 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 ESM1Q9NQ30 184 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 SIRT7Q9NRC8 400 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 ST3GAL6Q9Y274 331 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 hADV38S2A0JD32 116 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 SHISA3A0PJX4 238 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 CCRL2O00421 344 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 GEMIN2O14893 280 aaKnown RBP7.88□□□□□ -1.15
SRP54-210ENST00000556380 SLC22A1O15245 554 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 ARL6IP5O75915 188 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 RBP4P02753 201 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 ZNF728P0DKX0 622 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 CGB3P0DN86 165 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 CGB7P0DN87 165 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 GTF2F2P13984 249 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 ZNF44P15621 663 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 SERPINA2P20848 420 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 RANBP1P43487 201 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 GLIPR1P48060 266 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 UBE2E1P51965 193 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 EDDM3BP56851 147 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 AESQ08117 197 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 GPR176Q14439 515 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 EDDM3AQ14507 147 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 DEFB112Q30KQ8 113 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 GLT8D1Q68CQ7 371 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 LINC00596Q86U02 117 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 BPIFB2Q8N4F0 458 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 TPRX1Q8N7U7 411 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 ZNF418Q8TF45 676 aaPredicted RBP7.88□□□□□ -1.15
SRP54-210ENST00000556380 SUCNR1Q9BXA5 334 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 MS4A7Q9GZW8 240 aaPredicted RBP7.88□□□□□ -1.15
SRP54-210ENST00000556380 PPA2Q9H2U2 334 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 NCOR1P1Q9H4R4 102 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 PCDHB16Q9NRJ7 776 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 RCC2Q9P258 522 aaKnown RBP7.88□□□□□ -1.15
SRP54-210ENST00000556380 GHRLQ9UBU3 117 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 LINC00312Q9Y6C7 94 aa7.88□□□□□ -1.15
SRP54-210ENST00000556380 DSCAML1Q8TD84 2053 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 TRAV1-2A0A0B4J238 106 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 KRTAP9-6A0A140TA67 174 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 A0A1W2PPH5 198 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 ODAMA1E959 279 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 MEX3AA1L020 520 aaKnown RBP7.87□□□□□ -1.15
SRP54-210ENST00000556380 SLC17A2O00624 439 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 CSTBP04080 98 aaKnown RBP7.87□□□□□ -1.15
SRP54-210ENST00000556380 UBBP0CG47 229 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 CALRP27797 417 aaKnown RBP7.87□□□□□ -1.15
SRP54-210ENST00000556380 PSMB9P28065 219 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 FGF9P31371 208 aaPredicted RBP7.87□□□□□ -1.15
SRP54-210ENST00000556380 KLRD1Q13241 179 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 BLMHQ13867 455 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 TAF9Q16594 264 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 MPV17LQ2QL34 196 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 KRTAP24-1Q3LI83 254 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 NCR3LG1Q68D85 454 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 AWAT2Q6E213 333 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 SIGIRRQ6IA17 410 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 PDZD9Q8IXQ8 264 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 PNKDQ8N490 385 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 SUMF2Q8NBJ7 301 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 TSPAN14Q8NG11 270 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 PLPPR1Q8TBJ4 325 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 Q96M66 194 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 S100A13Q99584 98 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 DPCDQ9BVM2 203 aaPredicted RBP7.87□□□□□ -1.15
SRP54-210ENST00000556380 SLITRK2Q9H156 845 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 BANF2Q9H503 90 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 ZNF696Q9H7X3 374 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 LINC00574Q9H8X3 128 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 UBE2J1Q9Y385 318 aaPredicted RBP7.87□□□□□ -1.15
SRP54-210ENST00000556380 AK6Q9Y3D8 172 aaKnown RBP7.87□□□□□ -1.15
SRP54-210ENST00000556380 KIAA2026Q5HYC2 2103 aa7.87□□□□□ -1.15
SRP54-210ENST00000556380 A0A0U1RQK1 487 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 MDFIC2A0A1B0GVS7 189 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A10PA6NDY2 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A18PA6NE21 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A16PA6NEW6 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A20PA6NIJ5 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A8PA6NJQ4 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A7PA6NKC0 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A22PA8MWA6 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 TMEM14DPA8MWL7 114 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A12PA8MX19 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A5PA8MXJ8 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A23PA8MXZ1 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 CLDN34H7C241 214 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 NPFFO15130 113 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 MMP23AO75900 390 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 OR7C1O76099 320 aaPredicted RBP7.86□□□□□ -1.15
SRP54-210ENST00000556380 TNFAIP8O95379 198 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A15PP0C7V4 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A13PP0C7W8 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A14PP0C7W9 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 FAM90A24PP0C7X0 464 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 MGMTP16455 207 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 CFPP27918 469 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 HTR2CP28335 458 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 KCNJ3P48549 501 aa7.86□□□□□ -1.15
SRP54-210ENST00000556380 UNC119Q13432 240 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms