RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SPARCP09486 303 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 FRMD6-AS1P0C7T7 363 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 FAM106CPP0CH98 169 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 PIPP12273 146 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 MYF6P23409 242 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 HSD11B1P28845 292 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 FMO3P31513 532 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 PYCR1P32322 319 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 TNFSF8P32971 234 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 RPS27P42677 84 aaKnown RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 GPM6AP51674 278 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ACTA2P62736 377 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ACTG2P63267 376 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ACTC1P68032 377 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ACTA1P68133 377 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 MEF2CQ06413 473 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 EIF2B1Q14232 305 aaKnown RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 MAPRE2Q15555 327 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 SMIM21Q3B7S5 101 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 CEACAM21Q3KPI0 293 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF260Q3ZCT1 412 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 IFI44LQ53G44 452 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 FAM27D1Q5T7N8 215 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 TEX38Q6PEX7 206 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 KRT74Q7RTS7 529 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 KRT77Q7Z794 578 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 VTCN1Q7Z7D3 282 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF429Q86V71 674 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 EGFL6Q8IUX8 553 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 FAM86B1Q8N7N1 296 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF676Q8N7Q3 588 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 POC1AQ8NBT0 407 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 PROKR2Q8NFJ6 384 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 OR2T12Q8NG77 320 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 OR5A2Q8NGI9 324 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 TMEM170AQ8WVE7 144 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 AQP3Q92482 292 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ITFG2Q969R8 447 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 CREB3L1Q96BA8 519 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 PPP1R14BQ96C90 147 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 DGCR14Q96DF8 476 aaKnown RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 PGAM5Q96HS1 289 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF714Q96N38 554 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 DUX3Q96PT4 197 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 NRIP2Q9BQI9 281 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 TM2D3Q9BRN9 247 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 THTPAQ9BU02 230 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 CLEC7AQ9BXN2 247 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 FGF23Q9GZV9 251 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 OR52D1Q9H346 318 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF319Q9P2F9 582 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 HHLA2Q9UM44 414 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 FAM32AQ9Y421 112 aaKnown RBP3.77□□□□□ -1.81
ATXN3-239ENST00000556315 SESN1Q9Y6P5 492 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 ENPP4Q9Y6X5 453 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 HERC2O95714 4834 aa3.77□□□□□ -1.81
ATXN3-239ENST00000556315 STAB2Q8WWQ8 2551 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 TMEM272A0A1B0GTI8 110 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 DHRS12A0PJE2 317 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ARRDC5A6NEK1 342 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OR5B21A6NL26 309 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OOSP1A8MZH6 123 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 FAM220BPB1ANY3 271 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 H3BNX3 289 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 CCRL2O00421 344 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF682O95780 498 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 HOXB6P17509 224 aaKnown RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ACKR3P25106 362 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 MNDAP41218 407 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 RPL5P46777 297 aaKnown RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 CDX1P47902 265 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 BLVRAP53004 296 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF121P58317 390 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 EFNB1P98172 346 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 BDH1Q02338 343 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 SNAPC1Q16533 368 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 PNLIPRP3Q17RR3 467 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 COQ5Q5HYK3 327 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OGFRL1Q5TC84 451 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ASPHD1Q5U4P2 390 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OR52W1Q6IF63 320 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 HAGHLQ6PII5 290 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 GDPD3Q7L5L3 318 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 RTN4RL2Q86UN3 420 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF573Q86YE8 665 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 FOXRED2Q8IWF2 684 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ABHD12Q8N2K0 398 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 DRAM1Q8N682 238 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OR51L1Q8NGJ5 315 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OR4P4Q8NGL7 312 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OR4Q3Q8NH05 313 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ZNF596Q8TC21 504 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 FANK1Q8TC84 345 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 RNF133Q8WVZ7 376 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 ZNRF4Q8WWF5 429 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 HPSE2Q8WWQ2 592 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 RBMXL1Q96E39 390 aaKnown RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 NOL4LQ96MY1 436 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-239ENST00000556315 OR8B4Q96RC9 309 aa3.76□□□□□ -1.81
ATXN3-239ENST00000556315 GON7Q9BXV9 100 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms