RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 DPAGT1Q9H3H5 408 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 ZNRD1Q9P1U0 126 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 SESN1Q9Y6P5 492 aa12.37□□□□□ -0.43
ACTN1-217ENST00000556203 GEMIN2O14893 280 aaKnown RBP12.36□□□□□ -0.43
ACTN1-217ENST00000556203 CLPXO76031 633 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 UCHL1P09936 223 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 COMPP49747 757 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-217ENST00000556203 LGALS4P56470 323 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 LINC00596Q86U02 117 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 SUMF2Q8NBJ7 301 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 PHYHIPQ92561 330 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 CORO2AQ92828 525 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 AJUBAQ96IF1 538 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 DPCDQ9BVM2 203 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-217ENST00000556203 GAL3ST2Q9H3Q3 398 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 ACOT13Q9NPJ3 140 aa12.36□□□□□ -0.43
ACTN1-217ENST00000556203 BTBD17A6NE02 478 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 FAM181BA6NEQ2 426 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 MMP23AO75900 390 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 ARG1P05089 322 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 SRMP19623 302 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 PSMA1P25786 263 aaKnown RBP12.35□□□□□ -0.43
ACTN1-217ENST00000556203 EMX1Q04741 257 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-217ENST00000556203 DYNC1I2Q13409 638 aaKnown RBP12.35□□□□□ -0.43
ACTN1-217ENST00000556203 TRAM1Q15629 374 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 TAF9Q16594 264 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 MPV17LQ2QL34 196 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 AWAT1Q58HT5 328 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 GLT8D1Q68CQ7 371 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 TMEM91Q6ZNR0 172 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 BEND2Q8NDZ0 799 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 BARHL1Q9BZE3 327 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 SLITRK2Q9H156 845 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 BANF2Q9H503 90 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 TAS2R3Q9NYW6 316 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 OR6C3Q9NZP0 311 aa12.35□□□□□ -0.43
ACTN1-217ENST00000556203 MEIKINA0A087WXM9 373 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 ODF3BA8MYP8 253 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 MRPS14O60783 128 aaKnown RBP12.34□□□□□ -0.43
ACTN1-217ENST00000556203 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-217ENST00000556203 CRYBA1P05813 215 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 CDK2P24941 298 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 PAX6P26367 422 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 GABRA5P31644 462 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 GLP1RP43220 463 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 KCNJ3P48549 501 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 FOXL1Q12952 345 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 SSX1Q16384 188 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 RSBN1Q5VWQ0 802 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-217ENST00000556203 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 BAIAP2L2Q6UXY1 529 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 LHFPL4Q7Z7J7 247 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 SVOPQ8N4V2 548 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 TMEM104Q8NE00 496 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 OR11H6Q8NGC7 330 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 PLPPR1Q8TBJ4 325 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 FOXRED1Q96CU9 486 aaPredicted RBP12.34□□□□□ -0.43
ACTN1-217ENST00000556203 MRPS24Q96EL2 167 aaKnown RBP12.34□□□□□ -0.43
ACTN1-217ENST00000556203 TMEM133Q9H2Q1 129 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 KIF25Q9UIL4 384 aa12.34□□□□□ -0.43
ACTN1-217ENST00000556203 IGHV2-26A0A0B4J1V2 119 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 GPR137BO60478 399 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 MGMTP16455 207 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 OMGP23515 440 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 GDNFP39905 211 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 FABP5Q01469 135 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 C17orf58Q2M2W7 97 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 BRICD5Q6PL45 260 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 HEPN1Q6WQI6 88 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 SPARTQ8N0X7 666 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 OR13A1Q8NGR1 328 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 DYRK2Q92630 601 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 FAM46BQ96A09 425 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 CLEC7AQ9BXN2 247 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
ACTN1-217ENST00000556203 SELENOIQ9C0D9 397 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 MEGF9Q9H1U4 602 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 NCOR1P1Q9H4R4 102 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 VPREB3Q9UKI3 123 aa12.33□□□□□ -0.44
ACTN1-217ENST00000556203 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
ACTN1-217ENST00000556203 KBTBD11-OT1A0A1B0GTJ5 212 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 FAM172BPA6NC97 362 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 FAM90A8PA6NJQ4 464 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 ZNF729A6NN14 1252 aaPredicted RBP12.32□□□□□ -0.44
ACTN1-217ENST00000556203 H3BUX3 64 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 ARL6IP5O75915 188 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 CALRP27797 417 aaKnown RBP12.32□□□□□ -0.44
ACTN1-217ENST00000556203 PAX5Q02548 391 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 C1orf100Q5SVJ3 147 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 OR52W1Q6IF63 320 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 ABHD12Q8N2K0 398 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 C3orf56Q8N813 242 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 ZNF565Q8N9K5 539 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 OR5R1Q8NH85 324 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 MRGPRDQ8TDS7 321 aa12.32□□□□□ -0.44
ACTN1-217ENST00000556203 NEK7Q8TDX7 302 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms