RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 HIST2H2BCQ6DN03 193 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 Q6P435 159 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 C16orf87Q6PH81 154 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF788Q6ZQV5 615 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 TGIF2LYQ8IUE0 185 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 SMIM4Q8WVI0 70 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ST8SIA4Q92187 359 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 H1FXQ92522 213 aaKnown RBP9.36□□□□□ -0.91
SHMT2-220ENST00000555634 BORCS5Q969J3 196 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 GAFA1Q96PS6 74 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 CCL13Q99616 98 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 SULT4A1Q9BR01 284 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 FAAP24Q9BTP7 215 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 BPESC1Q9GZL8 116 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 NARFLQ9H6Q4 476 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ZMAT3Q9HA38 289 aaKnown RBP9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF286AQ9HBT8 521 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 DCAF16Q9NXF7 216 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 KAAG1Q9UBP8 84 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 AK3Q9UIJ7 227 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF222Q9UK12 451 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 V9GYH0 126 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 TEX15Q9BXT5 2789 aa9.36□□□□□ -0.91
SHMT2-220ENST00000555634 MEIKINA0A087WXM9 373 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 TRBV23-1A0A0A0MS06 115 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 TRAV24A0A0B4J272 114 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 hCG_1809904A0A1W2PP81 198 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 A0A1W2PPE2 198 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 A0A1W2PQ09 198 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 A0A1W2PR64 198 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 A0A1W2PRV1 198 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 hADV38S2A0JD32 116 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 CENPXA8MT69 81 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 K7N7A8 449 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 OR3A1P47881 315 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 PPP5CP53041 499 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 P2RX3P56373 397 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 TAS2R46P59540 309 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 DEFA1P59665 94 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 DEFA3P59666 94 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 C11orf91Q3C1V1 193 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 RNASE12Q5GAN4 147 aaKnown RBP9.35□□□□□ -0.91
SHMT2-220ENST00000555634 PLAC9Q5JTB6 97 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 BPIFB2Q8N4F0 458 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 CD177Q8N6Q3 437 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 DTX3Q8N9I9 347 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF565Q8N9K5 539 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 ZNRF1Q8ND25 227 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 C10orf105Q8TEF2 133 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 NUDCD2Q8WVJ2 157 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 SEH1LQ96EE3 360 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 SSBP3Q9BWW4 388 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-220ENST00000555634 GAL3ST2Q9H3Q3 398 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 TMEM165Q9HC07 324 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 ING3Q9NXR8 418 aa9.35□□□□□ -0.91
SHMT2-220ENST00000555634 USF3Q68DE3 2245 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 FOXI3A8MTJ6 420 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-220ENST00000555634 DVL1O14640 695 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 GSTZ1O43708 216 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-220ENST00000555634 MELTFP08582 738 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 AMY2BP19961 511 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 TBPP20226 339 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 ERP29P30040 261 aaKnown RBP9.34□□□□□ -0.91
SHMT2-220ENST00000555634 GLP1RP43220 463 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 KRTAP10-9P60411 292 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 PAX5Q02548 391 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 MEF2CQ06413 473 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-220ENST00000555634 CHRFAM7AQ494W8 412 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF57Q68EA5 555 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-220ENST00000555634 SIGIRRQ6IA17 410 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 SLC35E4Q6ICL7 350 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 PRSS57Q6UWY2 283 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF497Q6ZNH5 498 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 MFSD4AQ8N468 514 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 TOMM5Q8N4H5 51 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 DEDD2Q8WXF8 326 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 SRRQ9GZT4 340 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 PATZ1Q9HBE1 687 aaKnown RBP9.34□□□□□ -0.91
SHMT2-220ENST00000555634 PALMDQ9NP74 551 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 ZNF107Q9UII5 783 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-220ENST00000555634 AKAP6Q13023 2319 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 ARID1AO14497 2285 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 MYO9AB2RTY4 2548 aa9.34□□□□□ -0.91
SHMT2-220ENST00000555634 ODAMA1E959 279 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 SPINT2O43291 252 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 PSPNO60542 156 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF737O75373 536 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 IFNA6P05013 189 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 FCGR3AP08637 254 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 GDNFP39905 211 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 OR3A3P47888 321 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 TAS2R19P59542 299 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 RPL31P62899 125 aaKnown RBP9.33□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF79Q15937 498 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 TMEM30BQ3MIR4 351 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 BRICD5Q6PL45 260 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 C17orf107Q6ZR85 190 aa9.33□□□□□ -0.92
SHMT2-220ENST00000555634 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms