RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PPIHO43447 177 aaKnown RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 MTRF1O75570 445 aaKnown RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 DHRS3O75911 302 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 GRPP07492 148 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 HCKP08631 526 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 HLA-GP17693 338 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 H2BFSP57053 126 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 PRDX4Q13162 271 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 PRAMEF6Q5VXH4 476 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 GLIPR1L1Q6UWM5 242 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 SLC25A42Q86VD7 318 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CHST4Q8NCG5 386 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 SEMA6DQ8NFY4 1073 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 OR13C8Q8NGS7 320 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 C1orf147Q96MC9 270 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 NKX3-1Q99801 234 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 SLC6A7Q99884 636 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CST11Q9H112 138 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 LPAR5Q9H1C0 372 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CXXC4Q9H2H0 198 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 RGCCQ9H4X1 137 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 DCAF16Q9NXF7 216 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 KIF25Q9UIL4 384 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 HIVEP1P15822 2718 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 ABCA1O95477 2261 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 TEP1Q99973 2627 aaKnown RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 RPS10-NUDT3A0A1W2PQS6 291 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 A6NLC8 198 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 RFPL4AA6NLU0 287 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 RFPL4AL1F8VTS6 287 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CA11O75493 328 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 ZNF205O95201 554 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 RPA2P15927 270 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 HIST1H1DP16402 221 aaKnown RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CXCL2P19875 107 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 S100A11P31949 105 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 TAS2R31P59538 309 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 UBE2MP61081 183 aaKnown RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 TESK1Q15569 626 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 HFEQ30201 348 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 FAM209AQ5JX71 171 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 VAX1Q5SQQ9 334 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 AVPI1Q5T686 147 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 LIN54Q6MZP7 749 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 C11orf88Q6PI97 169 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 MOB3CQ70IA8 216 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 MOGAT3Q86VF5 341 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CIARTQ8N365 385 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 FAM89BQ8N5H3 189 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 BOLLQ8N9W6 283 aaKnown RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 OR5M8Q8NGP6 311 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 RDH5Q92781 318 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 RAB3CQ96E17 227 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CPNE2Q96FN4 548 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 MEGF10Q96KG7 1140 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 DIRC2Q96SL1 478 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 GAL3ST1Q99999 423 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 PIMREGQ9BSJ6 248 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 TMEM59Q9BXS4 323 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 SELENOIQ9C0D9 397 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CHST5Q9GZS9 411 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 CHST6Q9GZX3 395 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 ZMAT3Q9HA38 289 aaKnown RBP8.32□□□□□ -1.08
PSEN1-213ENST00000555386 ZNF391Q9UJN7 358 aa8.32□□□□□ -1.08
PSEN1-213ENST00000555386 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
PSEN1-213ENST00000555386 WNK2Q9Y3S1 2297 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 ARHGAP32A7KAX9 2087 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 DOCK11Q5JSL3 2073 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-213ENST00000555386 CEACAM18A8MTB9 384 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 RP2O75695 350 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 B3GALNT1O75752 331 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 IFNA6P05013 189 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 ZBTB25P24278 435 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 CD34P28906 385 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 HOXA4Q00056 320 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-213ENST00000555386 DHRS2Q13268 280 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 OR8B8Q15620 311 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 SCGB2B2Q4G0G5 96 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 NHLRC3Q5JS37 347 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 PLCXD3Q63HM9 321 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 TMEM65Q6PI78 240 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 PRSS57Q6UWY2 283 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 TMUB2Q71RG4 321 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 LYG2Q86SG7 212 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 ARRDC1Q8N5I2 433 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 CSNK2A3Q8NEV1 391 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 C10orf105Q8TEF2 133 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 NPRL2Q8WTW4 380 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 SCGB3A2Q96PL1 93 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 HIST1H2AAQ96QV6 131 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 GPER1Q99527 375 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 BPESC1Q9GZL8 116 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 GPR173Q9NS66 373 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 MED9Q9NWA0 146 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 IL19Q9UHD0 177 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 PPP1R3CQ9UQK1 317 aa8.31□□□□□ -1.08
PSEN1-213ENST00000555386 IGKV1-9A0A0C4DH69 117 aa8.3□□□□□ -1.08
PSEN1-213ENST00000555386 ZNF816-ZNF321PA0A0X1KG74 233 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms