RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CRTAPO75718 401 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-214ENST00000554928 CSTBP04080 98 aaKnown RBP10.06□□□□□ -0.8
SYNE2-214ENST00000554928 MELTFP08582 738 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 IGHV1-8P0DP01 117 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 MGMTP16455 207 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 OMGP23515 440 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 SAA4P35542 130 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 OR10A3P58181 314 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 MEF2CQ06413 473 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-214ENST00000554928 PLA2G7Q13093 441 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 UNC119Q13432 240 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 BLMHQ13867 455 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 P2RY14Q15391 338 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 NEDD8Q15843 81 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 RSBN1Q5VWQ0 802 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-214ENST00000554928 SIGIRRQ6IA17 410 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 CD200R1LQ6Q8B3 271 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 CHST4Q8NCG5 386 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 OR13A1Q8NGR1 328 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 PPP1R35Q8TAP8 253 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 TMEM158Q8WZ71 300 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 DYRK2Q92630 601 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 THRSPQ92748 146 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 S100A13Q99584 98 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 UQCC2Q9BRT2 126 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 DPCDQ9BVM2 203 aaPredicted RBP10.06□□□□□ -0.8
SYNE2-214ENST00000554928 SELENOIQ9C0D9 397 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 KIF25Q9UIL4 384 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 LINC00312Q9Y6C7 94 aa10.06□□□□□ -0.8
SYNE2-214ENST00000554928 A0A0A6YYD4 124 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 MEIOCA2RUB1 952 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 SMIM30A4D0T7 59 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 MEGF11A6BM72 1044 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 CCRL2O00421 344 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 SLC22A1O15245 554 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 MPIG6BO95866 241 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 IGHV4-59P01825 116 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 CSN2P05814 226 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 GTF2F2P13984 249 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 PSMA1P25786 263 aaKnown RBP10.05□□□□□ -0.8
SYNE2-214ENST00000554928 UBE2E1P51965 193 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 CLDN12P56749 244 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 BPIFB3P59826 476 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 QRFPP83859 136 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 TRAM1Q15629 374 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 C17orf58Q2M2W7 97 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 ATAD3CQ5T2N8 411 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 GLT8D1Q68CQ7 371 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 NCR3LG1Q68D85 454 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 C22orf42Q6IC83 251 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 Q6YL49 198 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 C5orf24Q7Z6I8 188 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 LHFPL4Q7Z7J7 247 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 TRAPPC6BQ86SZ2 158 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 NR2C2APQ86WQ0 139 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 DYNAPQ8N1N2 210 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 Q96M66 194 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 RNF167Q9H6Y7 350 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 IFT22Q9H7X7 185 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 DSCAML1Q8TD84 2053 aa10.05□□□□□ -0.8
SYNE2-214ENST00000554928 A0A0B4J203 849 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 TRDV1A0A1B0GX56 115 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 ZNF780AO75290 641 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-214ENST00000554928 CGB3P0DN86 165 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 CGB7P0DN87 165 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 JUNBP17275 347 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-214ENST00000554928 HTR2CP28335 458 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 GLP1RP43220 463 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 GUCA2AQ02747 115 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 MPV17LQ2QL34 196 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 FAM53AQ6NSI3 398 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-214ENST00000554928 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
SYNE2-214ENST00000554928 UBALD1Q8TB05 177 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 CORO2AQ92828 525 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 FOXRED1Q96CU9 486 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-214ENST00000554928 NICN1Q9BSH3 213 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 OR51E2Q9H255 320 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 RCC2Q9P258 522 aaKnown RBP10.04□□□□□ -0.8
SYNE2-214ENST00000554928 UBE2J1Q9Y385 318 aaPredicted RBP10.04□□□□□ -0.8
SYNE2-214ENST00000554928 SESN1Q9Y6P5 492 aa10.04□□□□□ -0.8
SYNE2-214ENST00000554928 MEIKINA0A087WXM9 373 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 TRGV10A0A0A0MS01 117 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 A0A1W2PPH5 198 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 TMEM14DPA8MWL7 114 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 ODF3BA8MYP8 253 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 TRIM77I1YAP6 450 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 SLC17A2O00624 439 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 ARL6IP5O75915 188 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 CLPXO76031 633 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 CDK2P24941 298 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 SYT6Q5T7P8 510 aaPredicted RBP10.03□□□□□ -0.8
SYNE2-214ENST00000554928 HES5Q5TA89 166 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 RFESDQ8TAC1 157 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 MRGPRDQ8TDS7 321 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 FAM216AQ8WUB2 273 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 CCDC107Q8WV48 283 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 FCGR1BQ92637 280 aa10.03□□□□□ -0.8
SYNE2-214ENST00000554928 JMJD8Q96S16 334 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms