RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 FAM27D1Q5T7N8 215 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 ZNF554Q86TJ5 538 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 SERPINA12Q8IW75 414 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 PDZD9Q8IXQ8 264 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 OR8H2Q8N162 312 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 ASCC1Q8N9N2 400 aaKnown RBP10.71□□□□□ -0.69
SHMT2-211ENST00000554310 OR5D14Q8NGL3 314 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 OR13C5Q8NGS8 318 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 DSCAML1Q8TD84 2053 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 SSMEM1Q8WWF3 244 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 THRSPQ92748 146 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 TNFRSF14Q92956 283 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 CPNE2Q96FN4 548 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-211ENST00000554310 PDCD1LG2Q9BQ51 273 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 SEBOXQ9HB31 216 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-211ENST00000554310 RBFOX1Q9NWB1 397 aaKnown RBP10.71□□□□□ -0.69
SHMT2-211ENST00000554310 ETAA1Q9NY74 926 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 ABRACLQ9P1F3 81 aa10.71□□□□□ -0.69
SHMT2-211ENST00000554310 TRBV5-5A0A0J9YX44 114 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 A0A0U1RQK1 487 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 hCG_1809904A0A1W2PP81 198 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 A0A1W2PPE2 198 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 A0A1W2PR64 198 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 A0A1W2PRV1 198 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 PDCD5O14737 125 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 NPFFO15130 113 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 HAND1O96004 215 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 APOA1P02647 267 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 CD2P06729 351 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 FBP1P09467 338 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 IL7P13232 177 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 BCL3P20749 454 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 MAPK3P27361 379 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-211ENST00000554310 FOXL1Q12952 345 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 PDZK1IP1Q13113 114 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 CNIH2Q6PI25 160 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 SAXO1Q8IYX7 474 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 FAM58AQ8N1B3 248 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 PIP4P2Q8N4L2 257 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 GPR148Q8TDV2 347 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 OR14A2Q96R54 314 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 RHOFQ9HBH0 211 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 FAM96BQ9Y3D0 163 aa10.7□□□□□ -0.7
SHMT2-211ENST00000554310 SPRY1O43609 319 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-211ENST00000554310 KDM4BO94953 1096 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 HCKP08631 526 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 PRKACAP17612 351 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 RAB3AP20336 220 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 NPBWR2P48146 333 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 UBE2E1P51965 193 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 SCN1BQ07699 218 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 KLRD1Q13241 179 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 ZNF146Q15072 292 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 BAK1Q16611 211 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 Q499Y3 187 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 AWAT1Q58HT5 328 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 TMEM200BQ69YZ2 307 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 GDPD3Q7L5L3 318 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 ZSCAN4Q8NAM6 433 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-211ENST00000554310 RGP1Q92546 391 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-211ENST00000554310 RFT1Q96AA3 541 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 SNX22Q96L94 193 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 CMTM3Q96MX0 182 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 DERL3Q96Q80 235 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 IL36RNQ9UBH0 155 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 GLS2Q9UI32 602 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 TBC1D24Q9ULP9 559 aa10.69□□□□□ -0.7
SHMT2-211ENST00000554310 NBEAL1Q6ZS30 2694 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 IGKV1-12A0A0C4DH73 117 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 TMEM82A0PJX8 343 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 PIN1P1O15428 100 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 ANGPTL7O43827 346 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 IGKV1D-12P01611 117 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 RBP4P02753 201 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 ELK1P19419 428 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 SRMP19623 302 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 CFPP27918 469 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 SAA4P35542 130 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 OR10A3P58181 314 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 RPL15P61313 204 aaKnown RBP10.68□□□□□ -0.7
SHMT2-211ENST00000554310 PRB3Q04118 309 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-211ENST00000554310 ASAH1Q13510 395 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 ZNF273Q14593 569 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 KISS1Q15726 138 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 MIDNQ504T8 468 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 PYDC2Q56P42 97 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 ZNF529Q6P280 563 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 C3orf56Q8N813 242 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 OR4M1Q8NGD0 313 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 OR5D18Q8NGL1 313 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 SPACA5Q96QH8 159 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 CHIAQ9BZP6 476 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 ZNRD1Q9P1U0 126 aa10.68□□□□□ -0.7
SHMT2-211ENST00000554310 TRBV5-7A0A0A0MS05 114 aa10.67□□□□□ -0.7
SHMT2-211ENST00000554310 MEIOCA2RUB1 952 aa10.67□□□□□ -0.7
SHMT2-211ENST00000554310 FAM25AB3EWG3 89 aa10.67□□□□□ -0.7
SHMT2-211ENST00000554310 FAM25CB3EWG5 89 aa10.67□□□□□ -0.7
SHMT2-211ENST00000554310 FAM25GB3EWG6 89 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms