RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PPIAL4EA0A075B759 164 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 PPIAL4CA0A0B4J2A2 164 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 A0A1B0GV72 72 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 DUXBA0A1W2PPF3 345 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 GAGE12BA1L429 117 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 OR2T8A6NH00 312 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 PPIAL4DF5H284 164 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 G3V3Y1 287 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 EFEMP2O95967 443 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 ISG15P05161 165 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 PPIAL4FP0DN26 164 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 CEBPBP17676 345 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 ZNF93P35789 620 aaPredicted RBP8.27□□□□□ -1.09
SIX4-202ENST00000554079 CTXN1P60606 82 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 KRTDAPP60985 99 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 SP6Q3SY56 376 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 FHL5Q5TD97 284 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 FAM78BQ5VT40 261 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 MRGPRGQ86SM5 289 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 UBALD2Q8IYN6 164 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 BATF2Q8N1L9 274 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 TMEM252Q8N6L7 170 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 KLHDC1Q8N7A1 406 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 OR5C1Q8NGR4 320 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 C11orf40Q8WZ69 217 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 ADIPOR1Q96A54 375 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 C8orf44Q96CB5 159 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 ARHGAP5-AS1Q96IT6 56 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 C1orf147Q96MC9 270 aaPredicted RBP8.27□□□□□ -1.09
SIX4-202ENST00000554079 RBM24Q9BX46 236 aaKnown RBP8.27□□□□□ -1.09
SIX4-202ENST00000554079 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
SIX4-202ENST00000554079 NAA60Q9H7X0 242 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 PLEKHF2Q9H8W4 249 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 COLQQ9Y215 455 aaPredicted RBP8.27□□□□□ -1.09
SIX4-202ENST00000554079 HIF3AQ9Y2N7 669 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 CCL15-CCL14A0A0B4J2E2 113 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 IGKV1-8A0A0C4DH67 115 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 A0A0U1RQK1 487 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 GJE1A6NN92 205 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 CXCL11O14625 94 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 RBFOX2O43251 390 aaKnown RBP eCLIP8.27□□□□□ -1.09
SIX4-202ENST00000554079 BNIP3LO60238 219 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 OR7C2O60412 319 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 GYPAP02724 150 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 OMGP23515 440 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 GABRA2P47869 451 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 CLDN15P56746 228 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 PPP1CBP62140 327 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 TLE3Q04726 772 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 GNMTQ14749 295 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 CCL15Q16663 113 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 LIAT1Q6ZQX7 453 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 RNF144BQ7Z419 303 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 LRRC25Q8N386 305 aaPredicted RBP8.27□□□□□ -1.09
SIX4-202ENST00000554079 TCTEX1D1Q8N7M0 179 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 OR1E3Q8WZA6 343 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 LMLNQ96KR4 655 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 TSPAN32Q96QS1 320 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 ST6GALNAC5Q9BVH7 336 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 G6PC2Q9NQR9 355 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 RPRMQ9NS64 109 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 ZNF586Q9NXT0 402 aa8.27□□□□□ -1.09
SIX4-202ENST00000554079 A0A0C4DFX4 3053 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 FREM3P0C091 2139 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 IGKV1D-42A0A075B6H8 117 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 LOC101059948A0A1B0GTJ6 334 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 ZNF840PA6NDX5 716 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 F2Z2F3 143 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 CDIPTO14735 213 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 SERPINA7P05543 415 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 STAG3L3P0CL85 134 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 CTSEP14091 401 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 SELPP16109 830 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 GLB1P16278 677 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 KITLGP21583 273 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 MC5RP33032 325 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 CLDN17P56750 224 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 EXT1Q16394 746 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 PLPPR5Q32ZL2 321 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 ACSF3Q4G176 576 aaPredicted RBP8.26□□□□□ -1.09
SIX4-202ENST00000554079 PLPP4Q5VZY2 271 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 SLC18B1Q6NT16 456 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 C22orf39Q6P5X5 142 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 LCN15Q6UWW0 184 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 TCF23Q7RTU1 214 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 MARCH3Q86UD3 253 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 SELENOHQ8IZQ5 122 aaKnown RBP8.26□□□□□ -1.09
SIX4-202ENST00000554079 ARHGEF39Q8N4T4 335 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 FER1L6-AS1Q8NA97 138 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 STXBP6Q8NFX7 210 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 MSI2Q96DH6 328 aaKnown RBP8.26□□□□□ -1.09
SIX4-202ENST00000554079 THAP10Q9P2Z0 257 aaPredicted RBP8.26□□□□□ -1.09
SIX4-202ENST00000554079 R4GMQ9 66 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 DOCK11Q5JSL3 2073 aa8.26□□□□□ -1.09
SIX4-202ENST00000554079 IGKV1D-8A0A087WSZ0 117 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 SERINC4A6NH21 518 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 HIDE1A8MVS5 230 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 GNG7O60262 68 aa8.25□□□□□ -1.09
SIX4-202ENST00000554079 NPIPB7O75200 414 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms