RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 UBE2J1Q9Y385 318 aaPredicted RBP18.99■□□□□ 0.63
NEK9-203ENST00000553945 IGHV1-8P0DP01 117 aa18.98■□□□□ 0.63
NEK9-203ENST00000553945 ACTG1P63261 375 aa18.98■□□□□ 0.63
NEK9-203ENST00000553945 MPV17LQ2QL34 196 aa18.98■□□□□ 0.63
NEK9-203ENST00000553945 UBE2UQ5VVX9 321 aa18.98■□□□□ 0.63
NEK9-203ENST00000553945 ZNF773Q6PK81 442 aa18.98■□□□□ 0.63
NEK9-203ENST00000553945 SUMF2Q8NBJ7 301 aa18.98■□□□□ 0.63
NEK9-203ENST00000553945 BANF2Q9H503 90 aa18.98■□□□□ 0.63
NEK9-203ENST00000553945 CRTAPO75718 401 aaPredicted RBP18.97■□□□□ 0.63
NEK9-203ENST00000553945 PAHP00439 452 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 FBP1P09467 338 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 CALRP27797 417 aaKnown RBP18.97■□□□□ 0.63
NEK9-203ENST00000553945 PSMB9P28065 219 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 TAF9Q16594 264 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 MIDNQ504T8 468 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 ATAD3CQ5T2N8 411 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 SPATA3Q8NHX4 192 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 CORO2AQ92828 525 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 MRPS24Q96EL2 167 aaKnown RBP18.97■□□□□ 0.63
NEK9-203ENST00000553945 DPCDQ9BVM2 203 aaPredicted RBP18.97■□□□□ 0.63
NEK9-203ENST00000553945 GAL3ST2Q9H3Q3 398 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 IFT22Q9H7X7 185 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 NDUFB11Q9NX14 153 aa18.97■□□□□ 0.63
NEK9-203ENST00000553945 CLDN34H7C241 214 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 CLPXO76031 633 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 RNASE1P07998 156 aaKnown RBP18.96■□□□□ 0.63
NEK9-203ENST00000553945 TMEM104Q8NE00 496 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 OR13D1Q8NGV5 346 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 FCGR1BQ92637 280 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 BARHL1Q9BZE3 327 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 SELENOIQ9C0D9 397 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 GHRLQ9UBU3 117 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 KIF25Q9UIL4 384 aa18.96■□□□□ 0.63
NEK9-203ENST00000553945 MEIKINA0A087WXM9 373 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 MGMTP16455 207 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 KCNJ3P48549 501 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 LGALS4P56470 323 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 C1orf100Q5SVJ3 147 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 BRICD5Q6PL45 260 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 LDLRAD3Q86YD5 345 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 PLPPR1Q8TBJ4 325 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 SSMEM1Q8WWF3 244 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 FAM46BQ96A09 425 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 TAS2R3Q9NYW6 316 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 OR6C3Q9NZP0 311 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 AK6Q9Y3D8 172 aaKnown RBP18.95■□□□□ 0.62
NEK9-203ENST00000553945 SESN1Q9Y6P5 492 aa18.95■□□□□ 0.62
NEK9-203ENST00000553945 CCRL2O00421 344 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 IGHV4-59P01825 116 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 UBBP0CG47 229 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 KCTD21Q4G0X4 260 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 PRAMEF5Q5TYX0 476 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 RSBN1Q5VWQ0 802 aaPredicted RBP18.94■□□□□ 0.62
NEK9-203ENST00000553945 NEK7Q8TDX7 302 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 C17orf50Q8WW18 174 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 GCDHQ92947 438 aaPredicted RBP18.94■□□□□ 0.62
NEK9-203ENST00000553945 CST11Q9H112 138 aa18.94■□□□□ 0.62
NEK9-203ENST00000553945 MMP23AO75900 390 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 ARG1P05089 322 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 CDK2P24941 298 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 HTR2CP28335 458 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 GLP1RP43220 463 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 DYNC1I2Q13409 638 aaKnown RBP18.93■□□□□ 0.62
NEK9-203ENST00000553945 TMEM86BQ8N661 226 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 OR6M1Q8NGM8 313 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 GFI1Q99684 422 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 PLGRKTQ9HBL7 147 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 SPACA1Q9HBV2 294 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 ZNRD1Q9P1U0 126 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 POMT1Q9Y6A1 747 aa18.93■□□□□ 0.62
NEK9-203ENST00000553945 SLC22A1O15245 554 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 MPIG6BO95866 241 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 CD37P11049 281 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 OMGP23515 440 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 IER3P46695 156 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 OR10K2Q6IF99 312 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 C16orf87Q6PH81 154 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 CD200R1LQ6Q8B3 271 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 ZNF565Q8N9K5 539 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 Q96M66 194 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 CHIAQ9BZP6 476 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 TMEM133Q9H2Q1 129 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 DPAGT1Q9H3H5 408 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 NCOR1P1Q9H4R4 102 aa18.92■□□□□ 0.62
NEK9-203ENST00000553945 TRDV1A0A1B0GX56 115 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 ZNF729A6NN14 1252 aaPredicted RBP18.91■□□□□ 0.62
NEK9-203ENST00000553945 MCRIP1C9JLW8 97 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 PAX5Q02548 391 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 P2RY14Q15391 338 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 SLC35E4Q6ICL7 350 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 OR52W1Q6IF63 320 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 RAB12Q6IQ22 244 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 HEPN1Q6WQI6 88 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 OR11H6Q8NGC7 330 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 OR13A1Q8NGR1 328 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 AJUBAQ96IF1 538 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 KCNK15Q9H427 330 aa18.91■□□□□ 0.62
NEK9-203ENST00000553945 RCC2Q9P258 522 aaKnown RBP18.91■□□□□ 0.62
NEK9-203ENST00000553945 IGHV2-26A0A0B4J1V2 119 aa18.9■□□□□ 0.62
NEK9-203ENST00000553945 TRAV39A0A0B4J263 110 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms