RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 HSMCR30P0CW71 290 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 RPL15P61313 204 aaKnown RBP16.54■□□□□ 0.24
FOXA1-203ENST00000553751 PAX5Q02548 391 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 ZNF626Q68DY1 528 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 GLIPR1L1Q6UWM5 242 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 LHFPL4Q7Z7J7 247 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 LINC00596Q86U02 117 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 OR4D6Q8NGJ1 314 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 TAS2R3Q9NYW6 316 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 VPREB3Q9UKI3 123 aa16.54■□□□□ 0.24
FOXA1-203ENST00000553751 FAM90A8PA6NJQ4 464 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 GEMIN2O14893 280 aaKnown RBP16.53■□□□□ 0.24
FOXA1-203ENST00000553751 ARG1P05089 322 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 GTF2F2P13984 249 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 OMGP23515 440 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 PAX6P26367 422 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 RELBQ01201 579 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 MLLT11Q13015 90 aaPredicted RBP16.53■□□□□ 0.24
FOXA1-203ENST00000553751 TBCEQ15813 527 aaPredicted RBP16.53■□□□□ 0.24
FOXA1-203ENST00000553751 PRAMEF5Q5TYX0 476 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 AWAT2Q6E213 333 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 LRRTM1Q86UE6 522 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 C3orf56Q8N813 242 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 OR5R1Q8NH85 324 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 PLPPR1Q8TBJ4 325 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 DPCDQ9BVM2 203 aaPredicted RBP16.53■□□□□ 0.24
FOXA1-203ENST00000553751 MEGF9Q9H1U4 602 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 TMEM133Q9H2Q1 129 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 C1RLQ9NZP8 487 aa16.53■□□□□ 0.24
FOXA1-203ENST00000553751 RRP15Q9Y3B9 282 aaKnown RBP16.53■□□□□ 0.24
FOXA1-203ENST00000553751 KIAA2026Q5HYC2 2103 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 IGHV2-26A0A0B4J1V2 119 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 BTBD17A6NE02 478 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 OR7C1O76099 320 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-203ENST00000553751 UCHL1P09936 223 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 LGALS4P56470 323 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 RPS25P62851 125 aaKnown RBP16.52■□□□□ 0.24
FOXA1-203ENST00000553751 GPR176Q14439 515 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 MPV17LQ2QL34 196 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 LDLRAD2Q5SZI1 272 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 RSBN1Q5VWQ0 802 aaPredicted RBP16.52■□□□□ 0.24
FOXA1-203ENST00000553751 HEPN1Q6WQI6 88 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 CEACAM19Q7Z692 300 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 SUMF2Q8NBJ7 301 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 PHYHIPQ92561 330 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 TMEM203Q969S6 136 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 UQCC2Q9BRT2 126 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 NCOR1P1Q9H4R4 102 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 TCF7L1Q9HCS4 588 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 PCDHB16Q9NRJ7 776 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 KIF25Q9UIL4 384 aa16.52■□□□□ 0.24
FOXA1-203ENST00000553751 TBL2Q9Y4P3 447 aaKnown RBP16.52■□□□□ 0.24
FOXA1-203ENST00000553751 MEGF11A6BM72 1044 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 H3BUX3 64 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 DENRO43583 198 aaKnown RBP16.51■□□□□ 0.23
FOXA1-203ENST00000553751 NDUFA7O95182 113 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 CRYBA1P05813 215 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 CPEP16870 476 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 MDKP21741 143 aaPredicted RBP16.51■□□□□ 0.23
FOXA1-203ENST00000553751 CDK2P24941 298 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 GDNFP39905 211 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 KCNJ3P48549 501 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 RAG2P55895 527 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 GABARAPL2P60520 117 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 AANATQ16613 207 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 LRRC75BQ2VPJ9 315 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 HSD17B12Q53GQ0 312 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 BAIAP2L2Q6UXY1 529 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 TMEM91Q6ZNR0 172 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 GDPGP1Q6ZNW5 385 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 DYNAPQ8N1N2 210 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 OR13A1Q8NGR1 328 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 MGLLQ99685 303 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 SSX3Q99909 188 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 OR6C3Q9NZP0 311 aa16.51■□□□□ 0.23
FOXA1-203ENST00000553751 MEIKINA0A087WXM9 373 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 ZNF729A6NN14 1252 aaPredicted RBP16.5■□□□□ 0.23
FOXA1-203ENST00000553751 HAX1O00165 279 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 CGB3P0DN86 165 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 CGB7P0DN87 165 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 GLP1RP43220 463 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 DYNC1I2Q13409 638 aaKnown RBP16.5■□□□□ 0.23
FOXA1-203ENST00000553751 C17orf58Q2M2W7 97 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 ZNF367Q7RTV3 350 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 TMEM104Q8NE00 496 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 MRPS24Q96EL2 167 aaKnown RBP16.5■□□□□ 0.23
FOXA1-203ENST00000553751 CLEC7AQ9BXN2 247 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 BARHL1Q9BZE3 327 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 Q9H521 79 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 ACOT13Q9NPJ3 140 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 RCC2Q9P258 522 aaKnown RBP16.5■□□□□ 0.23
FOXA1-203ENST00000553751 MMP24Q9Y5R2 645 aa16.5■□□□□ 0.23
FOXA1-203ENST00000553751 SRMP19623 302 aa16.49■□□□□ 0.23
FOXA1-203ENST00000553751 PSMA1P25786 263 aaKnown RBP16.49■□□□□ 0.23
FOXA1-203ENST00000553751 TRAM1Q15629 374 aa16.49■□□□□ 0.23
FOXA1-203ENST00000553751 FOXRED1Q96CU9 486 aaPredicted RBP16.49■□□□□ 0.23
FOXA1-203ENST00000553751 ZNF747Q9BV97 191 aa16.49■□□□□ 0.23
FOXA1-203ENST00000553751 KBTBD11-OT1A0A1B0GTJ5 212 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 VGLL3A8MV65 326 aa16.48■□□□□ 0.23
FOXA1-203ENST00000553751 MGMTP16455 207 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms