RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TFAMQ00059 246 aaKnown RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 NAB1Q13506 487 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 KIR2DS1Q14954 304 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TAL2Q16559 108 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 SNRNP35Q16560 246 aaKnown RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 NDUFAF6Q330K2 333 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 ABCA11PQ4W5N1 156 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 GUSBP11Q6P575 273 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 RTL4Q6ZR62 310 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 NCCRP1Q6ZVX7 275 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 MDP1Q86V88 176 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 COMTD1Q86VU5 262 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 PCP2Q8IVA1 136 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 SYS1Q8N2H4 156 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TMEM86AQ8N2M4 240 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 LRRC52Q8N7C0 313 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 FAM86B1Q8N7N1 296 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 CYB561D1Q8N8Q1 229 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 OR51A7Q8NH64 312 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 OR4C6Q8NH72 309 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 ERMNQ8TAM6 284 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TMEM239Q8WW34 195 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 CDS1Q92903 461 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TMEM159Q96B96 161 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 LINC00477Q96M19 166 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF317Q96PQ6 595 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TRNT1Q96Q11 434 aaKnown RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 CAMK2N2Q96S95 79 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 CYTH2Q99418 400 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 MAP1LC3CQ9BXW4 147 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 BEX2Q9BXY8 128 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 FRMD8P1Q9BZ68 369 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 TOLLIPQ9H0E2 274 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 NOX3Q9HBY0 568 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 HMG20AQ9NP66 347 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 FBXL12Q9NXK8 326 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 IL37Q9NZH6 218 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 MTFP1Q9UDX5 166 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 HIVEP1P15822 2718 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 ICE1Q9Y2F5 2266 aa2.01□□□□□ -2.09
SCFD1-210ENST00000553693 COL27A1Q8IZC6 1860 aaPredicted RBP2.01□□□□□ -2.09
SCFD1-210ENST00000553693 APCP25054 2843 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 TRAV8-4A0A0B4J246 113 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 IGHV3OR16-9A0A0B4J2B5 98 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 IGHV3-66A0A0C4DH42 116 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 FAM92AA1XBS5 289 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 SLC31A1O15431 190 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 ERI3O43414 337 aaKnown RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 ALOX12BO75342 701 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 TRAPPC6AO75865 159 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 PTTG1O95997 202 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 P01737 135 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 BCHEP06276 602 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 TPM3P06753 285 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 OR56A5P0C7T3 313 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 PGA4P0DJD7 388 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 PGA3P0DJD8 388 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 LIPCP11150 499 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF14P17017 642 aaPredicted RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 TCN2P20062 427 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 APLNRP35414 380 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 GGT2P36268 569 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 RGS6P49758 472 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 ZNF138P52744 262 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 HCCSP53701 268 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 MTPNP58546 118 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 TSPAN5P62079 268 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 RPL31P62899 125 aaKnown RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 GTF2BQ00403 316 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 CYP24A1Q07973 514 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 PPIDQ08752 370 aaKnown RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 IFFO1Q0D2I5 559 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 STX4Q12846 297 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 STX3Q13277 289 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 RBMY1FQ15415 496 aaKnown RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 CST6Q15828 149 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 DEFB133Q30KQ1 61 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 C18orf21Q32NC0 220 aaPredicted RBP2□□□□□ -2.09
SCFD1-210ENST00000553693 SMUG1Q53HV7 270 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 HSP90B2PQ58FF3 399 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 GCSAMLQ5JQS6 135 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 IDNKQ5T6J7 187 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 C9orf64Q5T6V5 341 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 RESP18Q5W5W9 173 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 PDPK2PQ6A1A2 396 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 SLC25A34Q6PIV7 304 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 DEGS2Q6QHC5 323 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 Q6ZSR6 202 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 C12orf56Q8IXR9 622 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 GPR26Q8NDV2 337 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 OR5B17Q8NGF7 314 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 UBALD1Q8TB05 177 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 LGALS14Q8TCE9 139 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 PIFOQ8TCI5 191 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 WFDC5Q8TCV5 224 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 DDI1Q8WTU0 396 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 TMEM234Q8WY98 164 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 FRZBQ92765 325 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 KLK6Q92876 244 aa2□□□□□ -2.09
SCFD1-210ENST00000553693 MRGPRFQ96AM1 343 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms