RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 ARPC5O15511 151 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 RP2O75695 350 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 TUSC2O75896 110 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 LYZL6O75951 148 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 OR7C1O76099 320 aaPredicted RBP5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 DIRAS3O95661 229 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 PLATP00750 562 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 WNT2P09544 360 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF728P0DKX0 622 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 VAMP1P23763 118 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 LMO1P25800 156 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 CEACAM8P31997 349 aaPredicted RBP5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 SERPINF1P36955 418 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 KIR2DS4P43632 304 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 AP2S1P53680 142 aaPredicted RBP5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 RAB14P61106 215 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 NAAAQ02083 359 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 ID3Q02535 119 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 PSG7Q13046 419 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 TMEM187Q14656 261 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 KIR2DS1Q14954 304 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF146Q15072 292 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 MBNL2Q5VZF2 373 aaKnown RBP5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 OR2T2Q6IF00 324 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 Q6P435 159 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 VWA1Q6PCB0 445 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 PRSS54Q6PEW0 395 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 KCTD9Q7L273 389 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 MYPOPQ86VE0 399 aaPredicted RBP5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 LDLRAD3Q86YD5 345 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 SPACA3Q8IXA5 215 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC38A6Q8IZM9 456 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 FAM185AQ8N0U4 392 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF610Q8N9Z0 462 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 SPERTQ8NA61 448 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 SCARB1Q8WTV0 552 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 CASTOR1Q8WTX7 329 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 EXTL1Q92935 676 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 SLAMF9Q96A28 289 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 PHYHIPLQ96FC7 376 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 PDCD10Q9BUL8 212 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 RTL8AQ9BWD3 113 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 BCL2L14Q9BZR8 327 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 OR2J1Q9GZK6 312 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 FXYD6Q9H0Q3 95 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 WDR13Q9H1Z4 485 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF442Q9H7R0 627 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 CHMP1AQ9HD42 196 aaPredicted RBP5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 C19orf73Q9NVV2 129 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 DNAJB11Q9UBS4 358 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 TUBD1Q9UJT1 453 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 PCDHB10Q9UN67 800 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 PROCRQ9UNN8 238 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 WASF3Q9UPY6 502 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 POLDIP2Q9Y2S7 368 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 AMDHD2Q9Y303 409 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 ATP23Q9Y6H3 246 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 DSCAML1Q8TD84 2053 aa5.11□□□□□ -1.59
VIPAS39-204ENST00000553576 ZNF292O60281 2723 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 TRAV24A0A0B4J272 114 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 TEX13DA0A0J9YY54 714 aaPredicted RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 C5orf51A6NDU8 294 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 TRDCB7Z8K6 153 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 NPIPB11E5RHQ5 1161 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 H7C1Q1 480 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 LOC400499M0QZD8 3231 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 CCSO14618 274 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 KLK10O43240 276 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SYNGR1O43759 233 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 CELA3BP08861 270 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 PGA5P0DJD9 388 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 RRASP10301 218 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 PGAM2P15259 253 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 PI3P19957 117 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 CA6P23280 308 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 HOXC12P31275 282 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 FCGR2CP31995 323 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 RBMXP38159 391 aaKnown RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 MDH2P40926 338 aaKnown RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 GLP1RP43220 463 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 IDH3GP51553 393 aaPredicted RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 PIGPP57054 158 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 LINC00310P59036 64 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 UBA52P62987 128 aaKnown RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 FOXF2Q12947 444 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 BAMBIQ13145 260 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC9A3R2Q15599 337 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SPIN3Q5JUX0 258 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 TIMM23BQ5SRD1 257 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 RIF1Q5UIP0 2472 aaKnown RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 RGS7BPQ6MZT1 257 aaPredicted RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 HAGHLQ6PII5 290 aaPredicted RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SLC22A25Q6T423 547 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 PCSK4Q6UW60 755 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 ASCL5Q7RTU5 278 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 CXorf67Q86X51 503 aaPredicted RBP5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 GCNT2Q8N0V5 402 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 CNEP1R1Q8N9A8 125 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 CCDC71LQ8N9Z2 235 aa5.1□□□□□ -1.59
VIPAS39-204ENST00000553576 SUMF2Q8NBJ7 301 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms