RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 LRRC75BQ2VPJ9 315 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 MINOS1Q5TGZ0 78 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 ZNF626Q68DY1 528 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 TCF23Q7RTU1 214 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 RTN4RL2Q86UN3 420 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 DTX3Q8N9I9 347 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 OR4D6Q8NGJ1 314 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 OR10K1Q8NGX5 313 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 ORAI1Q96D31 301 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 CNBD2Q96M20 576 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 OR5M11Q96RB7 305 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 CCDC90BQ9GZT6 254 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 Q9H521 79 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 TCF7L1Q9HCS4 588 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 RAB18Q9NP72 206 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 C1RLQ9NZP8 487 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 GHRLQ9UBU3 117 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 MINOS1-NBL1R4GNA1 71 aa12.47□□□□□ -0.41
SHMT2-204ENST00000553324 TRAV24A0A0B4J272 114 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 MEX3AA1L020 520 aaKnown RBP12.46□□□□□ -0.41
SHMT2-204ENST00000553324 OR7C1O76099 320 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-204ENST00000553324 SERPINA2P20848 420 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.41
SHMT2-204ENST00000553324 RAG2P55895 527 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 RBM11P57052 281 aaKnown RBP12.46□□□□□ -0.41
SHMT2-204ENST00000553324 PIGYQ3MUY2 71 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 SLC22A6Q4U2R8 563 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 PHYHIPQ92561 330 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 CREB3L1Q96BA8 519 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 AJUBAQ96IF1 538 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 TMED9Q9BVK6 235 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 CLEC7AQ9BXN2 247 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 SLITRK2Q9H156 845 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.41
SHMT2-204ENST00000553324 MRPS28Q9Y2Q9 187 aaKnown RBP12.46□□□□□ -0.41
SHMT2-204ENST00000553324 IGHV2-26A0A0B4J1V2 119 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 KBTBD11-OT1A0A1B0GTJ5 212 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 ZNF729A6NN14 1252 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-204ENST00000553324 VGLL3A8MV65 326 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 ODF3BA8MYP8 253 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 PIN1P1O15428 100 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 HSMCR30P0CW71 290 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 CDK2P24941 298 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 TPBGQ13641 420 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 ATXN7L3Q14CW9 347 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-204ENST00000553324 GLT8D1Q68CQ7 371 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 AWAT2Q6E213 333 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 DHRS7BQ6IAN0 325 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-204ENST00000553324 GLIPR1L1Q6UWM5 242 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 CEACAM19Q7Z692 300 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 ABHD12Q8N2K0 398 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 SGMS2Q8NHU3 365 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 C17orf50Q8WW18 174 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 SGCDQ92629 289 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 MUL1Q969V5 352 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 COQ2Q96H96 371 aa12.45□□□□□ -0.42
SHMT2-204ENST00000553324 DPCDQ9BVM2 203 aaPredicted RBP12.45□□□□□ -0.42
SHMT2-204ENST00000553324 MEIKINA0A087WXM9 373 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 CLPSL1A2RUU4 121 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 MAGEA13PA6NCF6 341 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 H3BUX3 64 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 HSPB6O14558 160 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 GEMIN2O14893 280 aaKnown RBP12.44□□□□□ -0.42
SHMT2-204ENST00000553324 MRPS14O60783 128 aaKnown RBP12.44□□□□□ -0.42
SHMT2-204ENST00000553324 SRMP19623 302 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 GZMHP20718 246 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 MDKP21741 143 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-204ENST00000553324 OMGP23515 440 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 HTR1DP28221 377 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 RANBP1P43487 201 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 MLLT11Q13015 90 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-204ENST00000553324 HSD17B12Q53GQ0 312 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 LIPKQ5VXJ0 399 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 OLFML2AQ68BL7 652 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 SLC35E4Q6ICL7 350 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 SUMF2Q8NBJ7 301 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 NKX3-1Q99801 234 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-204ENST00000553324 ABCB10Q9NRK6 738 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 ING3Q9NXR8 418 aa12.44□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A10PA6NDY2 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A18PA6NE21 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A16PA6NEW6 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A20PA6NIJ5 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A7PA6NKC0 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A22PA8MWA6 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A12PA8MX19 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A5PA8MXJ8 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A23PA8MXZ1 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 TOR1AO14656 332 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 SC5DO75845 299 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 TSPAN9O75954 239 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A15PP0C7V4 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A13PP0C7W8 464 aa12.43□□□□□ -0.42
SHMT2-204ENST00000553324 FAM90A14PP0C7W9 464 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms